Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.09■□□□□ 0.81
A0A1W2PRF3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
A0A1W2PRF3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
A0A1W2PRF3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
A0A1W2PRF3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
A0A1W2PRF3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.08■□□□□ 0.8
A0A1W2PRF3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.07■□□□□ 0.8
A0A1W2PRF3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.07■□□□□ 0.8
A0A1W2PRF3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.07■□□□□ 0.8
A0A1W2PRF3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
A0A1W2PRF3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
A0A1W2PRF3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A0A1W2PRF3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.06■□□□□ 0.8
A0A1W2PRF3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.06■□□□□ 0.8
A0A1W2PRF3 NTF6A-201ENST00000591175 560 ntBASIC20.06■□□□□ 0.8
A0A1W2PRF3 AC007029.1-201ENST00000604183 313 ntBASIC20.06■□□□□ 0.8
A0A1W2PRF3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
A0A1W2PRF3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
A0A1W2PRF3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.05■□□□□ 0.8
A0A1W2PRF3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
A0A1W2PRF3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
A0A1W2PRF3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
A0A1W2PRF3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
A0A1W2PRF3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
A0A1W2PRF3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.03■□□□□ 0.8
A0A1W2PRF3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
A0A1W2PRF3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
A0A1W2PRF3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.03■□□□□ 0.8
A0A1W2PRF3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.03■□□□□ 0.8
A0A1W2PRF3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A0A1W2PRF3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
A0A1W2PRF3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
A0A1W2PRF3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
A0A1W2PRF3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.02■□□□□ 0.8
A0A1W2PRF3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.02■□□□□ 0.8
A0A1W2PRF3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
A0A1W2PRF3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
A0A1W2PRF3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
A0A1W2PRF3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
A0A1W2PRF3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
A0A1W2PRF3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
A0A1W2PRF3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
A0A1W2PRF3 AC025884.2-201ENST00000553429 711 ntBASIC20.01■□□□□ 0.79
A0A1W2PRF3 AC133552.2-201ENST00000619106 1032 ntBASIC20.01■□□□□ 0.79
A0A1W2PRF3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
A0A1W2PRF3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
A0A1W2PRF3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
A0A1W2PRF3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20■□□□□ 0.79
A0A1W2PRF3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
A0A1W2PRF3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20■□□□□ 0.79
A0A1W2PRF3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
A0A1W2PRF3 AC093536.1-201ENST00000569153 554 ntBASIC20■□□□□ 0.79
A0A1W2PRF3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
A0A1W2PRF3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
A0A1W2PRF3 AC009831.1-201ENST00000580420 1582 ntBASIC20■□□□□ 0.79
A0A1W2PRF3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
A0A1W2PRF3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
A0A1W2PRF3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
A0A1W2PRF3 RP9P-202ENST00000450133 1212 ntBASIC19.99■□□□□ 0.79
A0A1W2PRF3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
A0A1W2PRF3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
A0A1W2PRF3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
A0A1W2PRF3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
A0A1W2PRF3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
A0A1W2PRF3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
A0A1W2PRF3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
A0A1W2PRF3 KRT18P60-201ENST00000312876 1297 ntBASIC19.97■□□□□ 0.79
A0A1W2PRF3 MIR3960-201ENST00000583311 91 ntBASIC19.97■□□□□ 0.79
A0A1W2PRF3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
A0A1W2PRF3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
A0A1W2PRF3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.96■□□□□ 0.79
A0A1W2PRF3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
A0A1W2PRF3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
A0A1W2PRF3 AL592293.1-201ENST00000502889 1188 ntBASIC19.96■□□□□ 0.79
A0A1W2PRF3 AP004609.3-201ENST00000610705 1884 ntBASIC19.96■□□□□ 0.79
A0A1W2PRF3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
A0A1W2PRF3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 AC026202.3-201ENST00000600805 1127 ntBASIC19.95■□□□□ 0.78
A0A1W2PRF3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
A0A1W2PRF3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
A0A1W2PRF3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 262.1 ms