Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAPPC1Q9Y5R8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 AC060834.1-201ENST00000443027 2032 ntBASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAPPC1Q9Y5R8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 AC092068.3-201ENST00000587894 2016 ntBASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 LYSMD4-203ENST00000378904 2122 ntBASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 DBET-201ENST00000630918 3363 ntBASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAPPC1Q9Y5R8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 AC024909.3-201ENST00000611513 2257 ntBASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 TERF1P5-201ENST00000477545 1207 ntBASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 AL136162.1-201ENST00000607711 1078 ntBASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAPPC1Q9Y5R8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms