Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 CA15P1-201ENST00000481698 905 ntBASIC15.7■□□□□ 0.1
DUX4Q9UBX2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 AL353719.1-201ENST00000566847 864 ntBASIC15.7■□□□□ 0.1
DUX4Q9UBX2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 AC116562.4-202ENST00000641738 218 ntBASIC15.7■□□□□ 0.1
DUX4Q9UBX2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX4Q9UBX2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 CCR12P-201ENST00000446203 998 ntBASIC15.69■□□□□ 0.1
DUX4Q9UBX2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 AC097493.4-201ENST00000641197 219 ntBASIC15.69■□□□□ 0.1
DUX4Q9UBX2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
DUX4Q9UBX2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 AD000864.1-201ENST00000624076 2295 ntBASIC15.68■□□□□ 0.1
DUX4Q9UBX2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 AL023284.2-201ENST00000405850 579 ntBASIC15.68■□□□□ 0.1
DUX4Q9UBX2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX4Q9UBX2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX4Q9UBX2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms