Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 PCDHB19P-201ENST00000570871 2371 ntBASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC52A3Q9NQ40 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 AC046185.3-201ENST00000623228 1824 ntBASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 LINC01311-201ENST00000565162 1445 ntBASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC52A3Q9NQ40 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC52A3Q9NQ40 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SLC52A3Q9NQ40 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC52A3Q9NQ40 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC52A3Q9NQ40 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC52A3Q9NQ40 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 ECEL1P2-202ENST00000465689 757 ntBASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 AC024563.2-201ENST00000603282 481 ntBASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 AC079602.3-201ENST00000623931 403 ntBASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC52A3Q9NQ40 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 AIRN-201ENST00000601203 4374 ntBASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 HMGA1P5-201ENST00000412453 271 ntBASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 ECEL1P3-201ENST00000427961 737 ntBASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 AL512604.3-201ENST00000569583 964 ntBASIC16.82■□□□□ 0.28
SLC52A3Q9NQ40 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms