Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.14■□□□□ 0.33
CLPTM1LQ96KA5 CROCCP1-201ENST00000426910 5675 ntBASIC17.14■□□□□ 0.33
CLPTM1LQ96KA5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1LQ96KA5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLPTM1LQ96KA5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.14■□□□□ 0.33
CLPTM1LQ96KA5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 MTDHP1-201ENST00000605323 784 ntBASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 AC011298.2-201ENST00000617989 482 ntBASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 AL024508.2-201ENST00000607749 1894 ntBASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.13■□□□□ 0.33
CLPTM1LQ96KA5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 AC036111.1-201ENST00000533973 1582 ntBASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 TSPY6P-201ENST00000448518 926 ntBASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 DUTP2-201ENST00000519164 463 ntBASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLPTM1LQ96KA5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.11■□□□□ 0.33
CLPTM1LQ96KA5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms