Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.67■□□□□ 0.14e-8■□□□□ 10.4
LARP4Q71RC2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.59■□□□□ 0.094e-8■□□□□ 10.4
LARP4Q71RC2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.064e-8■□□□□ 10.4
LARP4Q71RC2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.264e-8■□□□□ 10.4
LARP4Q71RC2 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC11.56□□□□□ -0.564e-8■□□□□ 10.4
LARP4Q71RC2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.529e-7■□□□□ 10.4
LARP4Q71RC2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.71■■□□□ 1.399e-7■□□□□ 10.4
LARP4Q71RC2 NRSN2-204ENST00000492242 846 ntTSL 219.68■□□□□ 0.749e-7■□□□□ 10.4
LARP4Q71RC2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.429e-7■□□□□ 10.4
LARP4Q71RC2 YPEL3-206ENST00000565479 865 ntTSL 517.47■□□□□ 0.398e-10■□□□□ 10.4
LARP4Q71RC2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.38■□□□□ 0.378e-10■□□□□ 10.4
LARP4Q71RC2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.348e-10■□□□□ 10.4
LARP4Q71RC2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.348e-10■□□□□ 10.4
LARP4Q71RC2 C1orf43-207ENST00000470180 1861 ntTSL 516.68■□□□□ 0.269e-9■□□□□ 10.4
LARP4Q71RC2 SLC35D2-205ENST00000490599 715 ntTSL 216.36■□□□□ 0.219e-7■□□□□ 10.4
LARP4Q71RC2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.212e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.21■□□□□ 0.199e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.14■□□□□ 0.179e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.05■□□□□ 0.169e-9■□□□□ 10.4
LARP4Q71RC2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.119e-7■□□□□ 10.4
LARP4Q71RC2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.19e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.039e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.6□□□□□ -0.079e-9■□□□□ 10.4
LARP4Q71RC2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.41□□□□□ -0.19e-9■□□□□ 10.4
LARP4Q71RC2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.179e-7■□□□□ 10.4
LARP4Q71RC2 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC12.52□□□□□ -0.419e-7■□□□□ 10.4
LARP4Q71RC2 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC12.46□□□□□ -0.419e-7■□□□□ 10.4
LARP4Q71RC2 NRSN2-207ENST00000608875 941 ntTSL 312.14□□□□□ -0.479e-7■□□□□ 10.4
LARP4Q71RC2 RPL5-201ENST00000315741 681 ntTSL 511.98□□□□□ -0.491e-14■□□□□ 10.4
LARP4Q71RC2 YPEL3-212ENST00000570099 669 ntTSL 311.27□□□□□ -0.618e-10■□□□□ 10.4
LARP4Q71RC2 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.611e-14■□□□□ 10.4
LARP4Q71RC2 RPS28P7-201ENST00000473748 210 ntBASIC8.44□□□□□ -1.062e-9■□□□□ 10.4
LARP4Q71RC2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.03□□□□□ -1.129e-7■□□□□ 10.4
LARP4Q71RC2 RPL5-204ENST00000470843 694 ntTSL 34.15□□□□□ -1.751e-14■□□□□ 10.4
LARP4Q71RC2 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.58□□□□□ -1.21e-323■□□□□ 10.4
LARP4Q71RC2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.83□□□□□ -1.321e-323■□□□□ 10.4
LARP4Q71RC2 ALB-208ENST00000495173 445 ntTSL 36.01□□□□□ -1.451e-323■□□□□ 10.4
LARP4Q71RC2 ALB-205ENST00000476441 1604 ntTSL 55.74□□□□□ -1.491e-323■□□□□ 10.4
LARP4Q71RC2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.61□□□□□ -1.511e-323■□□□□ 10.4
LARP4Q71RC2 ALB-216ENST00000511370 1519 ntTSL 55.34□□□□□ -1.551e-323■□□□□ 10.4
LARP4Q71RC2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.13□□□□□ -1.591e-323■□□□□ 10.4
LARP4Q71RC2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.03□□□□□ -1.61e-323■□□□□ 10.4
LARP4Q71RC2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.641e-323■□□□□ 10.4
LARP4Q71RC2 ALB-213ENST00000508932 369 ntTSL 33.57□□□□□ -1.841e-323■□□□□ 10.4
LARP4Q71RC2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.892e-12■□□□□ 10.3
LARP4Q71RC2 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)20.49■□□□□ 0.875e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-205ENST00000558036 2108 ntTSL 219.85■□□□□ 0.775e-6■□□□□ 10.3
LARP4Q71RC2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.62e-12■□□□□ 10.3
LARP4Q71RC2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.62e-12■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-214ENST00000455441 596 ntTSL 418.64■□□□□ 0.571e-9■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-205ENST00000427315 544 ntTSL 418.54■□□□□ 0.561e-9■□□□□ 10.3
LARP4Q71RC2 TJP2-205ENST00000423935 614 ntTSL 217.51■□□□□ 0.395e-6■□□□□ 10.3
LARP4Q71RC2 MARS-202ENST00000447721 1328 ntTSL 217.16■□□□□ 0.345e-6■□□□□ 10.3
LARP4Q71RC2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.325e-6■□□□□ 10.3
LARP4Q71RC2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.315e-6■□□□□ 10.3
LARP4Q71RC2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.32e-7■□□□□ 10.3
LARP4Q71RC2 SNRPA1-203ENST00000540017 506 ntTSL 1 (best)16.78■□□□□ 0.285e-6■□□□□ 10.3
LARP4Q71RC2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.275e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.235e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.25e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-202ENST00000394082 556 ntTSL 1 (best)15.83■□□□□ 0.125e-6■□□□□ 10.3
LARP4Q71RC2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.095e-6■□□□□ 10.3
LARP4Q71RC2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.39■□□□□ 0.055e-6■□□□□ 10.3
LARP4Q71RC2 MARS-212ENST00000548630 557 ntTSL 215.09■□□□□ 0.015e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -05e-6■□□□□ 10.3
LARP4Q71RC2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -02e-12■□□□□ 10.3
LARP4Q71RC2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -05e-6■□□□□ 10.3
LARP4Q71RC2 MARS-206ENST00000546971 711 ntTSL 214.93□□□□□ -0.025e-6■□□□□ 10.3
LARP4Q71RC2 MARS-204ENST00000545888 2979 ntTSL 514.82□□□□□ -0.045e-6■□□□□ 10.3
LARP4Q71RC2 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)14.27□□□□□ -0.135e-6■□□□□ 10.3
LARP4Q71RC2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.145e-6■□□□□ 10.3
LARP4Q71RC2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.155e-6■□□□□ 10.3
LARP4Q71RC2 MARS-216ENST00000549048 755 ntTSL 314.04□□□□□ -0.165e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-207ENST00000559309 924 ntTSL 514.04□□□□□ -0.165e-6■□□□□ 10.3
LARP4Q71RC2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.195e-6■□□□□ 10.3
LARP4Q71RC2 FIP1L1-205ENST00000505125 3180 ntTSL 1 (best)13.75□□□□□ -0.212e-12■□□□□ 10.3
LARP4Q71RC2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.215e-6■□□□□ 10.3
LARP4Q71RC2 SEMA4C-203ENST00000449330 839 ntTSL 313.38□□□□□ -0.275e-6■□□□□ 10.3
LARP4Q71RC2 MARS-203ENST00000537638 3592 ntTSL 213.27□□□□□ -0.295e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-211ENST00000636247 3725 ntTSL 1 (best)12.96□□□□□ -0.335e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.345e-6■□□□□ 10.3
LARP4Q71RC2 MARS-215ENST00000548944 294 ntTSL 312.8□□□□□ -0.365e-6■□□□□ 10.3
LARP4Q71RC2 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.375e-6■□□□□ 10.3
LARP4Q71RC2 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.375e-6■□□□□ 10.3
LARP4Q71RC2 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)12.66□□□□□ -0.385e-6■□□□□ 10.3
LARP4Q71RC2 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC12.55□□□□□ -0.45e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.465e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-216ENST00000458216 507 ntTSL 312.11□□□□□ -0.471e-9■□□□□ 10.3
LARP4Q71RC2 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.555e-6■□□□□ 10.3
LARP4Q71RC2 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.44□□□□□ -0.585e-6■□□□□ 10.3
LARP4Q71RC2 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.625e-6■□□□□ 10.3
LARP4Q71RC2 EIF5B-204ENST00000494190 664 ntTSL 211.1□□□□□ -0.635e-6■□□□□ 10.3
LARP4Q71RC2 TJP2-210ENST00000606364 591 ntTSL 411.05□□□□□ -0.645e-6■□□□□ 10.3
LARP4Q71RC2 ST6GAL1-207ENST00000438590 608 ntTSL 310.97□□□□□ -0.651e-9■□□□□ 10.3
LARP4Q71RC2 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.665e-6■□□□□ 10.3
LARP4Q71RC2 SNRPA1-211ENST00000560433 2440 ntTSL 210.64□□□□□ -0.715e-6■□□□□ 10.3
LARP4Q71RC2 SLC6A6-207ENST00000618278 6401 ntTSL 510.63□□□□□ -0.715e-6■□□□□ 10.3
LARP4Q71RC2 CBFA2T3-208ENST00000566868 284 ntTSL 510.43□□□□□ -0.745e-6■□□□□ 10.3
LARP4Q71RC2 UTP11-201ENST00000373014 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.815e-6■□□□□ 10.3
LARP4Q71RC2 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.95e-6■□□□□ 10.3
Retrieved 100 of 15,922 protein–RNA pairs in 304 ms