RNA–Protein interactions for RNA: ENST00000570099.5

YPEL3-212, Transcript of yippee like 3, humanhuman

TSL 3

Gene YPEL3, Length 669 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-212ENST00000570099 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
YPEL3-212ENST00000570099 ABCC9O60706 1549 aa30.86■■■□□ 2.53
YPEL3-212ENST00000570099 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
YPEL3-212ENST00000570099 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
YPEL3-212ENST00000570099 RB1CC1Q8TDY2 1594 aa29.02■■■□□ 2.24
YPEL3-212ENST00000570099 NACADO15069 1562 aa28.62■■■□□ 2.17
YPEL3-212ENST00000570099 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
YPEL3-212ENST00000570099 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
YPEL3-212ENST00000570099 DCAF8L2P0C7V8 631 aa28.29■■■□□ 2.12
YPEL3-212ENST00000570099 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
YPEL3-212ENST00000570099 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
YPEL3-212ENST00000570099 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
YPEL3-212ENST00000570099 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
YPEL3-212ENST00000570099 CC2D2AQ9P2K1 1620 aa27.84■■■□□ 2.05
YPEL3-212ENST00000570099 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
YPEL3-212ENST00000570099 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
YPEL3-212ENST00000570099 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
YPEL3-212ENST00000570099 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
YPEL3-212ENST00000570099 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
YPEL3-212ENST00000570099 CUX2O14529 1486 aa26.96■■□□□ 1.91
YPEL3-212ENST00000570099 ERCC6Q03468 1493 aa26.73■■□□□ 1.87
YPEL3-212ENST00000570099 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
YPEL3-212ENST00000570099 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
YPEL3-212ENST00000570099 NESP48681 1621 aa26.25■■□□□ 1.79
YPEL3-212ENST00000570099 ATAD2BQ9ULI0 1458 aa26.22■■□□□ 1.79
YPEL3-212ENST00000570099 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
YPEL3-212ENST00000570099 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
YPEL3-212ENST00000570099 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
YPEL3-212ENST00000570099 SMARCA4P51532 1647 aa25.98■■□□□ 1.75
YPEL3-212ENST00000570099 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
YPEL3-212ENST00000570099 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
YPEL3-212ENST00000570099 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
YPEL3-212ENST00000570099 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
YPEL3-212ENST00000570099 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
YPEL3-212ENST00000570099 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
YPEL3-212ENST00000570099 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
YPEL3-212ENST00000570099 WDR62O43379 1518 aa25.63■■□□□ 1.69
YPEL3-212ENST00000570099 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
YPEL3-212ENST00000570099 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
YPEL3-212ENST00000570099 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
YPEL3-212ENST00000570099 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
YPEL3-212ENST00000570099 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
YPEL3-212ENST00000570099 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
YPEL3-212ENST00000570099 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
YPEL3-212ENST00000570099 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
YPEL3-212ENST00000570099 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
YPEL3-212ENST00000570099 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
YPEL3-212ENST00000570099 WIZO95785 1651 aa25.12■■□□□ 1.61
YPEL3-212ENST00000570099 CFTRP13569 1480 aa25.1■■□□□ 1.61
YPEL3-212ENST00000570099 TRHP20396 242 aaPredicted RBP25.05■■□□□ 1.6
YPEL3-212ENST00000570099 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
YPEL3-212ENST00000570099 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
YPEL3-212ENST00000570099 ZNF608Q9ULD9 1512 aaPredicted RBP24.95■■□□□ 1.58
YPEL3-212ENST00000570099 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
YPEL3-212ENST00000570099 ARAP1Q96P48 1450 aa24.86■■□□□ 1.57
YPEL3-212ENST00000570099 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
YPEL3-212ENST00000570099 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
YPEL3-212ENST00000570099 CHD1O14646 1710 aa24.76■■□□□ 1.55
YPEL3-212ENST00000570099 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
YPEL3-212ENST00000570099 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
YPEL3-212ENST00000570099 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
YPEL3-212ENST00000570099 FBLN2P98095 1184 aa24.65■■□□□ 1.54
YPEL3-212ENST00000570099 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.531e-18■■□□□ 14.5
YPEL3-212ENST00000570099 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
YPEL3-212ENST00000570099 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
YPEL3-212ENST00000570099 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
YPEL3-212ENST00000570099 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
YPEL3-212ENST00000570099 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.5
YPEL3-212ENST00000570099 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
YPEL3-212ENST00000570099 SYNJ1O43426 1573 aa24.38■■□□□ 1.49
YPEL3-212ENST00000570099 SNAPC4Q5SXM2 1469 aa24.36■■□□□ 1.49
YPEL3-212ENST00000570099 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
YPEL3-212ENST00000570099 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
YPEL3-212ENST00000570099 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
YPEL3-212ENST00000570099 SOGA1O94964 1423 aa24.28■■□□□ 1.48
YPEL3-212ENST00000570099 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
YPEL3-212ENST00000570099 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
YPEL3-212ENST00000570099 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
YPEL3-212ENST00000570099 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
YPEL3-212ENST00000570099 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
YPEL3-212ENST00000570099 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
YPEL3-212ENST00000570099 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
YPEL3-212ENST00000570099 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
YPEL3-212ENST00000570099 CUX1P39880 1505 aa23.97■■□□□ 1.43
YPEL3-212ENST00000570099 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
YPEL3-212ENST00000570099 ILDR1Q86SU0 546 aaPredicted RBP23.94■■□□□ 1.42
YPEL3-212ENST00000570099 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
YPEL3-212ENST00000570099 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
YPEL3-212ENST00000570099 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
YPEL3-212ENST00000570099 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
YPEL3-212ENST00000570099 NUP160Q12769 1436 aa23.82■■□□□ 1.4
YPEL3-212ENST00000570099 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
YPEL3-212ENST00000570099 KDM4FA0A1W2PPD8 638 aa23.78■■□□□ 1.4
YPEL3-212ENST00000570099 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
YPEL3-212ENST00000570099 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
YPEL3-212ENST00000570099 ABCC10Q5T3U5 1492 aa23.73■■□□□ 1.39
YPEL3-212ENST00000570099 KDM6BO15054 1643 aa23.68■■□□□ 1.38
YPEL3-212ENST00000570099 PRG4Q92954 1404 aaPredicted RBP23.66■■□□□ 1.38
YPEL3-212ENST00000570099 NPM1P06748 294 aaKnown RBP eCLIP23.64■■□□□ 1.37
YPEL3-212ENST00000570099 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms