RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
SLC6A6-204ENST00000613060 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
SLC6A6-204ENST00000613060 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
SLC6A6-204ENST00000613060 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
SLC6A6-204ENST00000613060 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
SLC6A6-204ENST00000613060 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
SLC6A6-204ENST00000613060 APLP2Q06481 763 aa18.95■□□□□ 0.62
SLC6A6-204ENST00000613060 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
SLC6A6-204ENST00000613060 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
SLC6A6-204ENST00000613060 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
SLC6A6-204ENST00000613060 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
SLC6A6-204ENST00000613060 ERICH6Q7L0X2 663 aa18.62■□□□□ 0.57
SLC6A6-204ENST00000613060 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
SLC6A6-204ENST00000613060 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
SLC6A6-204ENST00000613060 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
SLC6A6-204ENST00000613060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
SLC6A6-204ENST00000613060 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
SLC6A6-204ENST00000613060 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
SLC6A6-204ENST00000613060 MYT1Q01538 1121 aa18.2■□□□□ 0.5
SLC6A6-204ENST00000613060 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
SLC6A6-204ENST00000613060 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
SLC6A6-204ENST00000613060 CENPBP07199 599 aaPredicted RBP18.02■□□□□ 0.48
SLC6A6-204ENST00000613060 NEFLP07196 543 aa17.98■□□□□ 0.47
SLC6A6-204ENST00000613060 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
SLC6A6-204ENST00000613060 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
SLC6A6-204ENST00000613060 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
SLC6A6-204ENST00000613060 BCANQ96GW7 911 aa17.85■□□□□ 0.45
SLC6A6-204ENST00000613060 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
SLC6A6-204ENST00000613060 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
SLC6A6-204ENST00000613060 ZEB1P37275 1124 aaPredicted RBP17.72■□□□□ 0.43
SLC6A6-204ENST00000613060 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
SLC6A6-204ENST00000613060 ITGAEP38570 1179 aa17.64■□□□□ 0.41
SLC6A6-204ENST00000613060 A0A0G2JS52 829 aa17.58■□□□□ 0.4
SLC6A6-204ENST00000613060 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
SLC6A6-204ENST00000613060 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
SLC6A6-204ENST00000613060 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
SLC6A6-204ENST00000613060 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
SLC6A6-204ENST00000613060 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
SLC6A6-204ENST00000613060 ZBTB47Q9UFB7 747 aaPredicted RBP17.36■□□□□ 0.37
SLC6A6-204ENST00000613060 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
SLC6A6-204ENST00000613060 FBLN2P98095 1184 aa17.34■□□□□ 0.37
SLC6A6-204ENST00000613060 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
SLC6A6-204ENST00000613060 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
SLC6A6-204ENST00000613060 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
SLC6A6-204ENST00000613060 TULP1O00294 542 aaPredicted RBP17.15■□□□□ 0.34
SLC6A6-204ENST00000613060 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
SLC6A6-204ENST00000613060 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
SLC6A6-204ENST00000613060 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
SLC6A6-204ENST00000613060 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
SLC6A6-204ENST00000613060 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
SLC6A6-204ENST00000613060 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
SLC6A6-204ENST00000613060 NEFMP07197 916 aa17.03■□□□□ 0.32
SLC6A6-204ENST00000613060 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
SLC6A6-204ENST00000613060 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
SLC6A6-204ENST00000613060 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
SLC6A6-204ENST00000613060 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
SLC6A6-204ENST00000613060 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
SLC6A6-204ENST00000613060 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
SLC6A6-204ENST00000613060 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
SLC6A6-204ENST00000613060 ARXQ96QS3 562 aa16.85■□□□□ 0.29
SLC6A6-204ENST00000613060 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
SLC6A6-204ENST00000613060 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
SLC6A6-204ENST00000613060 NPHP1O15259 732 aa16.78■□□□□ 0.28
SLC6A6-204ENST00000613060 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
SLC6A6-204ENST00000613060 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
SLC6A6-204ENST00000613060 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLC6A6-204ENST00000613060 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
SLC6A6-204ENST00000613060 KRI1Q8N9T8 703 aaKnown RBP16.58■□□□□ 0.25
SLC6A6-204ENST00000613060 HRCP23327 699 aa16.58■□□□□ 0.24
SLC6A6-204ENST00000613060 ARID4BQ4LE39 1312 aaPredicted RBP16.57■□□□□ 0.24
SLC6A6-204ENST00000613060 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
SLC6A6-204ENST00000613060 CLSTN1O94985 981 aa16.56■□□□□ 0.24
SLC6A6-204ENST00000613060 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
SLC6A6-204ENST00000613060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SLC6A6-204ENST00000613060 PRM3Q9NNZ6 103 aa16.51■□□□□ 0.23
SLC6A6-204ENST00000613060 HSP90AA1P07900 732 aaKnown RBP16.5■□□□□ 0.23
SLC6A6-204ENST00000613060 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
SLC6A6-204ENST00000613060 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
SLC6A6-204ENST00000613060 ANP32CO43423 234 aa16.48■□□□□ 0.23
SLC6A6-204ENST00000613060 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
SLC6A6-204ENST00000613060 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
SLC6A6-204ENST00000613060 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
SLC6A6-204ENST00000613060 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
SLC6A6-204ENST00000613060 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
SLC6A6-204ENST00000613060 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
SLC6A6-204ENST00000613060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.215e-6■□□□□ 10.5
SLC6A6-204ENST00000613060 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
SLC6A6-204ENST00000613060 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
SLC6A6-204ENST00000613060 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
SLC6A6-204ENST00000613060 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
SLC6A6-204ENST00000613060 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
SLC6A6-204ENST00000613060 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
SLC6A6-204ENST00000613060 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
SLC6A6-204ENST00000613060 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
SLC6A6-204ENST00000613060 LOC105371045A0A1W2PR82 267 aa16.2■□□□□ 0.18
SLC6A6-204ENST00000613060 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
SLC6A6-204ENST00000613060 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
SLC6A6-204ENST00000613060 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
SLC6A6-204ENST00000613060 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
SLC6A6-204ENST00000613060 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms