RNA–Protein interactions for RNA: ENST00000473748.1

RPS28P7-201, Transcript of ribosomal protein S28 pseudogene 7, humanhuman

BASIC

Gene RPS28P7, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P7-201ENST00000473748 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
RPS28P7-201ENST00000473748 ABCC9O60706 1549 aa21.7■■□□□ 1.07
RPS28P7-201ENST00000473748 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
RPS28P7-201ENST00000473748 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
RPS28P7-201ENST00000473748 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
RPS28P7-201ENST00000473748 NACADO15069 1562 aa20.34■□□□□ 0.85
RPS28P7-201ENST00000473748 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
RPS28P7-201ENST00000473748 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
RPS28P7-201ENST00000473748 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
RPS28P7-201ENST00000473748 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
RPS28P7-201ENST00000473748 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
RPS28P7-201ENST00000473748 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
RPS28P7-201ENST00000473748 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
RPS28P7-201ENST00000473748 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
RPS28P7-201ENST00000473748 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
RPS28P7-201ENST00000473748 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
RPS28P7-201ENST00000473748 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
RPS28P7-201ENST00000473748 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
RPS28P7-201ENST00000473748 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
RPS28P7-201ENST00000473748 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
RPS28P7-201ENST00000473748 CUX2O14529 1486 aa18.78■□□□□ 0.6
RPS28P7-201ENST00000473748 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
RPS28P7-201ENST00000473748 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
RPS28P7-201ENST00000473748 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
RPS28P7-201ENST00000473748 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
RPS28P7-201ENST00000473748 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
RPS28P7-201ENST00000473748 NESP48681 1621 aa18.58■□□□□ 0.56
RPS28P7-201ENST00000473748 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
RPS28P7-201ENST00000473748 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
RPS28P7-201ENST00000473748 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
RPS28P7-201ENST00000473748 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
RPS28P7-201ENST00000473748 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
RPS28P7-201ENST00000473748 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
RPS28P7-201ENST00000473748 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
RPS28P7-201ENST00000473748 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
RPS28P7-201ENST00000473748 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
RPS28P7-201ENST00000473748 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
RPS28P7-201ENST00000473748 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
RPS28P7-201ENST00000473748 WIZO95785 1651 aa18.09■□□□□ 0.49
RPS28P7-201ENST00000473748 WDR62O43379 1518 aa18.08■□□□□ 0.49
RPS28P7-201ENST00000473748 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
RPS28P7-201ENST00000473748 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
RPS28P7-201ENST00000473748 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
RPS28P7-201ENST00000473748 CFTRP13569 1480 aa17.96■□□□□ 0.47
RPS28P7-201ENST00000473748 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
RPS28P7-201ENST00000473748 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
RPS28P7-201ENST00000473748 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
RPS28P7-201ENST00000473748 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
RPS28P7-201ENST00000473748 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
RPS28P7-201ENST00000473748 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
RPS28P7-201ENST00000473748 RIMBP3CA6NJZ7 1639 aa17.66■□□□□ 0.42
RPS28P7-201ENST00000473748 RIMBP3BA6NNM3 1639 aa17.66■□□□□ 0.42
RPS28P7-201ENST00000473748 RIMBP3Q9UFD9 1639 aa17.66■□□□□ 0.42
RPS28P7-201ENST00000473748 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
RPS28P7-201ENST00000473748 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
RPS28P7-201ENST00000473748 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
RPS28P7-201ENST00000473748 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
RPS28P7-201ENST00000473748 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
RPS28P7-201ENST00000473748 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPS28P7-201ENST00000473748 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
RPS28P7-201ENST00000473748 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
RPS28P7-201ENST00000473748 FBLN2P98095 1184 aa17.51■□□□□ 0.39
RPS28P7-201ENST00000473748 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
RPS28P7-201ENST00000473748 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
RPS28P7-201ENST00000473748 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
RPS28P7-201ENST00000473748 CHD1O14646 1710 aa17.42■□□□□ 0.38
RPS28P7-201ENST00000473748 SOGA1O94964 1423 aa17.41■□□□□ 0.38
RPS28P7-201ENST00000473748 ARAP1Q96P48 1450 aa17.41■□□□□ 0.38
RPS28P7-201ENST00000473748 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
RPS28P7-201ENST00000473748 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
RPS28P7-201ENST00000473748 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
RPS28P7-201ENST00000473748 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
RPS28P7-201ENST00000473748 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
RPS28P7-201ENST00000473748 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
RPS28P7-201ENST00000473748 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
RPS28P7-201ENST00000473748 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
RPS28P7-201ENST00000473748 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
RPS28P7-201ENST00000473748 CUX1P39880 1505 aa17.24■□□□□ 0.35
RPS28P7-201ENST00000473748 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
RPS28P7-201ENST00000473748 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
RPS28P7-201ENST00000473748 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
RPS28P7-201ENST00000473748 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
RPS28P7-201ENST00000473748 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
RPS28P7-201ENST00000473748 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
RPS28P7-201ENST00000473748 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
RPS28P7-201ENST00000473748 GRIN2AQ12879 1464 aa17■□□□□ 0.31
RPS28P7-201ENST00000473748 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
RPS28P7-201ENST00000473748 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
RPS28P7-201ENST00000473748 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
RPS28P7-201ENST00000473748 NUP160Q12769 1436 aa16.96■□□□□ 0.31
RPS28P7-201ENST00000473748 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
RPS28P7-201ENST00000473748 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
RPS28P7-201ENST00000473748 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
RPS28P7-201ENST00000473748 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
RPS28P7-201ENST00000473748 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
RPS28P7-201ENST00000473748 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
RPS28P7-201ENST00000473748 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
RPS28P7-201ENST00000473748 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
RPS28P7-201ENST00000473748 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
RPS28P7-201ENST00000473748 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms