RNA–Protein interactions for RNA: ENST00000566868.1

CBFA2T3-208, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 5

Gene CBFA2T3, Length 284 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-208ENST00000566868 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
CBFA2T3-208ENST00000566868 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
CBFA2T3-208ENST00000566868 ABCC9O60706 1549 aa24.41■■□□□ 1.5
CBFA2T3-208ENST00000566868 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
CBFA2T3-208ENST00000566868 NACADO15069 1562 aa23.39■■□□□ 1.33
CBFA2T3-208ENST00000566868 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
CBFA2T3-208ENST00000566868 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
CBFA2T3-208ENST00000566868 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
CBFA2T3-208ENST00000566868 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
CBFA2T3-208ENST00000566868 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
CBFA2T3-208ENST00000566868 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
CBFA2T3-208ENST00000566868 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
CBFA2T3-208ENST00000566868 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
CBFA2T3-208ENST00000566868 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
CBFA2T3-208ENST00000566868 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
CBFA2T3-208ENST00000566868 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
CBFA2T3-208ENST00000566868 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
CBFA2T3-208ENST00000566868 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
CBFA2T3-208ENST00000566868 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
CBFA2T3-208ENST00000566868 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
CBFA2T3-208ENST00000566868 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
CBFA2T3-208ENST00000566868 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
CBFA2T3-208ENST00000566868 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
CBFA2T3-208ENST00000566868 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
CBFA2T3-208ENST00000566868 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
CBFA2T3-208ENST00000566868 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
CBFA2T3-208ENST00000566868 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
CBFA2T3-208ENST00000566868 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
CBFA2T3-208ENST00000566868 WIZO95785 1651 aa21.15■□□□□ 0.98
CBFA2T3-208ENST00000566868 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
CBFA2T3-208ENST00000566868 NESP48681 1621 aa21.07■□□□□ 0.96
CBFA2T3-208ENST00000566868 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.95
CBFA2T3-208ENST00000566868 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
CBFA2T3-208ENST00000566868 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
CBFA2T3-208ENST00000566868 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
CBFA2T3-208ENST00000566868 CUX2O14529 1486 aa20.92■□□□□ 0.94
CBFA2T3-208ENST00000566868 CFTRP13569 1480 aa20.81■□□□□ 0.92
CBFA2T3-208ENST00000566868 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
CBFA2T3-208ENST00000566868 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
CBFA2T3-208ENST00000566868 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
CBFA2T3-208ENST00000566868 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
CBFA2T3-208ENST00000566868 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
CBFA2T3-208ENST00000566868 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
CBFA2T3-208ENST00000566868 WDR62O43379 1518 aa20.6■□□□□ 0.89
CBFA2T3-208ENST00000566868 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
CBFA2T3-208ENST00000566868 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
CBFA2T3-208ENST00000566868 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
CBFA2T3-208ENST00000566868 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
CBFA2T3-208ENST00000566868 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
CBFA2T3-208ENST00000566868 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
CBFA2T3-208ENST00000566868 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
CBFA2T3-208ENST00000566868 IFT140Q96RY7 1462 aa20.28■□□□□ 0.84
CBFA2T3-208ENST00000566868 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
CBFA2T3-208ENST00000566868 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
CBFA2T3-208ENST00000566868 CUX1P39880 1505 aa20.12■□□□□ 0.81
CBFA2T3-208ENST00000566868 SOGA1O94964 1423 aa20.11■□□□□ 0.81
CBFA2T3-208ENST00000566868 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
CBFA2T3-208ENST00000566868 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
CBFA2T3-208ENST00000566868 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
CBFA2T3-208ENST00000566868 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
CBFA2T3-208ENST00000566868 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.82e-8■■■■□ 25.6
CBFA2T3-208ENST00000566868 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
CBFA2T3-208ENST00000566868 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
CBFA2T3-208ENST00000566868 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
CBFA2T3-208ENST00000566868 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
CBFA2T3-208ENST00000566868 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
CBFA2T3-208ENST00000566868 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
CBFA2T3-208ENST00000566868 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
CBFA2T3-208ENST00000566868 FBLN2P98095 1184 aa19.87■□□□□ 0.77
CBFA2T3-208ENST00000566868 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
CBFA2T3-208ENST00000566868 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
CBFA2T3-208ENST00000566868 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
CBFA2T3-208ENST00000566868 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
CBFA2T3-208ENST00000566868 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
CBFA2T3-208ENST00000566868 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
CBFA2T3-208ENST00000566868 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
CBFA2T3-208ENST00000566868 CHD1O14646 1710 aa19.77■□□□□ 0.76
CBFA2T3-208ENST00000566868 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
CBFA2T3-208ENST00000566868 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
CBFA2T3-208ENST00000566868 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
CBFA2T3-208ENST00000566868 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
CBFA2T3-208ENST00000566868 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
CBFA2T3-208ENST00000566868 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
CBFA2T3-208ENST00000566868 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
CBFA2T3-208ENST00000566868 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
CBFA2T3-208ENST00000566868 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
CBFA2T3-208ENST00000566868 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
CBFA2T3-208ENST00000566868 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
CBFA2T3-208ENST00000566868 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
CBFA2T3-208ENST00000566868 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
CBFA2T3-208ENST00000566868 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
CBFA2T3-208ENST00000566868 NUP160Q12769 1436 aa19.55■□□□□ 0.72
CBFA2T3-208ENST00000566868 IGF1RP08069 1367 aa19.55■□□□□ 0.72
CBFA2T3-208ENST00000566868 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
CBFA2T3-208ENST00000566868 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
CBFA2T3-208ENST00000566868 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
CBFA2T3-208ENST00000566868 CUL7Q14999 1698 aa19.41■□□□□ 0.7
CBFA2T3-208ENST00000566868 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
CBFA2T3-208ENST00000566868 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
CBFA2T3-208ENST00000566868 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms