Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 AC005089.1-201ENST00000619486 2241 ntBASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 AC005562.1-201ENST00000583030 3219 ntBASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCP4L1A6NKN8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 AC009237.14-201ENST00000609975 1594 ntBASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 AC006058.4-201ENST00000624016 1670 ntBASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.88□□□□□ -0.19
PCP4L1A6NKN8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.87□□□□□ -0.19
PCP4L1A6NKN8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCP4L1A6NKN8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms