Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZNF217-205ENST00000540425 568 ntTSL 36.63□□□□□ -1.352e-18■■□□□ 14
CSTF2TQ9H0L4 GATAD2A-212ENST00000494516 640 ntTSL 219.02■□□□□ 0.641e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATAD2A-204ENST00000417582 655 ntTSL 218.65■□□□□ 0.581e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATAD2A-213ENST00000609040 1652 ntTSL 217■□□□□ 0.311e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.211e-6■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-226ENST00000494621 871 ntTSL 317.11■□□□□ 0.335e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-206ENST00000437658 931 ntTSL 215.75■□□□□ 0.115e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-213ENST00000466330 746 ntTSL 314.11□□□□□ -0.155e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-212ENST00000464375 626 ntTSL 313.57□□□□□ -0.245e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-216ENST00000475743 590 ntTSL 413.46□□□□□ -0.255e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-214ENST00000466975 560 ntTSL 412.6□□□□□ -0.395e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-205ENST00000417778 760 ntTSL 312.26□□□□□ -0.455e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-209ENST00000455226 585 ntTSL 410.99□□□□□ -0.655e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-207ENST00000454122 731 ntTSL 310.76□□□□□ -0.695e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-208ENST00000454278 595 ntTSL 410.59□□□□□ -0.715e-17■■□□□ 13.9
CSTF2TQ9H0L4 ZNF638-220ENST00000487707 592 ntTSL 39.99□□□□□ -0.815e-17■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-215ENST00000554567 730 ntTSL 525.26■■□□□ 1.632e-7■■□□□ 13.9
CSTF2TQ9H0L4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.84■■□□□ 1.092e-7■■□□□ 13.9
CSTF2TQ9H0L4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.832e-7■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-221ENST00000555498 595 ntAPPRIS ALT2 TSL 319■□□□□ 0.632e-7■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-212ENST00000419133 1078 ntTSL 516.29■□□□□ 0.23e-6■■□□□ 13.9
CSTF2TQ9H0L4 AL049757.1-201ENST00000616842 1596 ntBASIC16.09■□□□□ 0.172e-7■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-222ENST00000455483 579 ntTSL 515.65■□□□□ 0.13e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-210ENST00000412658 2091 ntTSL 515.61■□□□□ 0.093e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-211ENST00000412898 831 ntTSL 514.5□□□□□ -0.093e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-223ENST00000456869 597 ntTSL 314.5□□□□□ -0.093e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.13e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-218ENST00000445029 606 ntTSL 313.85□□□□□ -0.193e-6■■□□□ 13.9
CSTF2TQ9H0L4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.76□□□□□ -0.212e-7■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-221ENST00000452551 811 ntTSL 313.25□□□□□ -0.293e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.343e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-217ENST00000438643 537 ntTSL 1 (best)12.77□□□□□ -0.373e-6■■□□□ 13.9
CSTF2TQ9H0L4 BRD1-204ENST00000438393 3051 ntTSL 212.51□□□□□ -0.412e-7■■□□□ 13.9
CSTF2TQ9H0L4 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-7■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-215ENST00000430289 929 ntTSL 512.27□□□□□ -0.453e-6■■□□□ 13.9
CSTF2TQ9H0L4 GGT1-209ENST00000411974 758 ntTSL 312.23□□□□□ -0.453e-6■■□□□ 13.9
CSTF2TQ9H0L4 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.592e-7■■□□□ 13.9
CSTF2TQ9H0L4 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC11.06□□□□□ -0.642e-7■■□□□ 13.9
CSTF2TQ9H0L4 ELOVL6-207ENST00000513003 204 ntTSL 28.58□□□□□ -1.042e-7■■□□□ 13.9
CSTF2TQ9H0L4 SNRPD3-203ENST00000404603 715 ntTSL 57.75□□□□□ -1.173e-6■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-225ENST00000557267 291 ntTSL 37.01□□□□□ -1.292e-7■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.582e-7■■□□□ 13.9
CSTF2TQ9H0L4 FAR2P4-202ENST00000425399 584 ntBASIC4.81□□□□□ -1.647e-12■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -22e-7■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.44□□□□□ -2.022e-7■■□□□ 13.9
CSTF2TQ9H0L4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.152e-7■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-205ENST00000491825 837 ntTSL 213.97□□□□□ -0.172e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-203ENST00000470278 939 ntTSL 513.76□□□□□ -0.212e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-206ENST00000492796 1174 ntTSL 29.95□□□□□ -0.822e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.862e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.922e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.132e-6■■□□□ 13.9
CSTF2TQ9H0L4 CDC42SE1-204ENST00000483763 2379 ntTSL 1 (best)7.79□□□□□ -1.162e-6■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.59■■□□□ 1.536e-7■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.26e-7■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-209ENST00000567504 578 ntTSL 315.33■□□□□ 0.046e-7■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-203ENST00000561844 738 ntTSL 313.27□□□□□ -0.296e-7■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-206ENST00000565086 685 ntTSL 312.85□□□□□ -0.356e-7■■□□□ 13.9
CSTF2TQ9H0L4 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.08□□□□□ -0.486e-7■■□□□ 13.9
CSTF2TQ9H0L4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.64■□□□□ 0.251e-9■■□□□ 13.9
CSTF2TQ9H0L4 ANPEP-209ENST00000560137 638 ntTSL 314.52□□□□□ -0.093e-11■■□□□ 13.9
CSTF2TQ9H0L4 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.823e-11■■□□□ 13.9
CSTF2TQ9H0L4 ANPEP-205ENST00000559874 663 ntTSL 38.82□□□□□ -13e-11■■□□□ 13.9
CSTF2TQ9H0L4 AC132872.1-201ENST00000566986 1195 ntBASIC13.22□□□□□ -0.298e-10■■□□□ 13.9
CSTF2TQ9H0L4 TSPAN32-205ENST00000437313 734 ntTSL 518.04■□□□□ 0.486e-7■■□□□ 13.9
CSTF2TQ9H0L4 GLI4-205ENST00000519876 585 ntTSL 315.8■□□□□ 0.127e-7■■□□□ 13.9
CSTF2TQ9H0L4 COL9A3-211ENST00000477612 635 ntTSL 320.37■□□□□ 0.857e-6■■□□□ 13.9
CSTF2TQ9H0L4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.75■□□□□ 0.278e-8■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.22□□□□□ -0.132e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.63□□□□□ -0.392e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.67□□□□□ -0.542e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.63□□□□□ -0.552e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.24□□□□□ -0.612e-6■■□□□ 13.9
CSTF2TQ9H0L4 SHANK2-205ENST00000412252 1376 ntTSL 511.05□□□□□ -0.642e-6■■□□□ 13.9
CSTF2TQ9H0L4 PFKL-211ENST00000498841 3122 ntTSL 1 (best)15.5■□□□□ 0.071e-7■■□□□ 13.9
CSTF2TQ9H0L4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.111e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.96■■□□□ 1.111e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATA4-203ENST00000526716 686 ntTSL 421.28■■□□□ 11e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.53■□□□□ 0.081e-6■■□□□ 13.9
CSTF2TQ9H0L4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.041e-6■■□□□ 13.9
CSTF2TQ9H0L4 TCAF1-202ENST00000392900 2513 ntTSL 211.51□□□□□ -0.571e-9■■□□□ 13.9
CSTF2TQ9H0L4 TCAF1-206ENST00000485416 577 ntTSL 49.45□□□□□ -0.91e-9■■□□□ 13.9
CSTF2TQ9H0L4 TCAF1-207ENST00000491908 634 ntTSL 29.36□□□□□ -0.911e-9■■□□□ 13.9
CSTF2TQ9H0L4 TCAF1-203ENST00000460532 840 ntTSL 29.1□□□□□ -0.951e-9■■□□□ 13.9
CSTF2TQ9H0L4 IGFL2-AS1-205ENST00000599817 340 ntTSL 210.1□□□□□ -0.794e-8■■□□□ 13.9
CSTF2TQ9H0L4 IGFL2-AS1-201ENST00000594027 294 ntTSL 310.04□□□□□ -0.84e-8■■□□□ 13.9
CSTF2TQ9H0L4 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC9.81□□□□□ -0.845e-13■■□□□ 13.9
CSTF2TQ9H0L4 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC9.74□□□□□ -0.854e-8■■□□□ 13.9
CSTF2TQ9H0L4 IREB2-203ENST00000558570 2917 ntTSL 1 (best)5.1□□□□□ -1.595e-13■■□□□ 13.9
CSTF2TQ9H0L4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.635e-13■■□□□ 13.9
CSTF2TQ9H0L4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.6■□□□□ 0.891e-6■■□□□ 13.9
CSTF2TQ9H0L4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.44■□□□□ 0.221e-6■■□□□ 13.9
CSTF2TQ9H0L4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■□□□ 13.9
CSTF2TQ9H0L4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-6■■□□□ 13.9
CSTF2TQ9H0L4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.081e-7■■□□□ 13.9
CSTF2TQ9H0L4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.211e-7■■□□□ 13.9
CSTF2TQ9H0L4 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.511e-7■■□□□ 13.9
CSTF2TQ9H0L4 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.631e-7■■□□□ 13.9
Retrieved 100 of 19,151 protein–RNA pairs in 194.6 ms