RNA–Protein interactions for RNA: ENST00000460532.5

TCAF1-203, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-203ENST00000460532 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
TCAF1-203ENST00000460532 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
TCAF1-203ENST00000460532 ABCC9O60706 1549 aa20.56■□□□□ 0.88
TCAF1-203ENST00000460532 NACADO15069 1562 aa19.91■□□□□ 0.78
TCAF1-203ENST00000460532 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
TCAF1-203ENST00000460532 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
TCAF1-203ENST00000460532 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
TCAF1-203ENST00000460532 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
TCAF1-203ENST00000460532 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
TCAF1-203ENST00000460532 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
TCAF1-203ENST00000460532 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.67
TCAF1-203ENST00000460532 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
TCAF1-203ENST00000460532 SHROOM4Q9ULL8 1493 aa19.18■□□□□ 0.66
TCAF1-203ENST00000460532 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
TCAF1-203ENST00000460532 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
TCAF1-203ENST00000460532 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
TCAF1-203ENST00000460532 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
TCAF1-203ENST00000460532 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
TCAF1-203ENST00000460532 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
TCAF1-203ENST00000460532 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
TCAF1-203ENST00000460532 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
TCAF1-203ENST00000460532 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
TCAF1-203ENST00000460532 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
TCAF1-203ENST00000460532 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
TCAF1-203ENST00000460532 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
TCAF1-203ENST00000460532 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
TCAF1-203ENST00000460532 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
TCAF1-203ENST00000460532 WIZO95785 1651 aa18.09■□□□□ 0.49
TCAF1-203ENST00000460532 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
TCAF1-203ENST00000460532 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
TCAF1-203ENST00000460532 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
TCAF1-203ENST00000460532 NESP48681 1621 aa17.79■□□□□ 0.44
TCAF1-203ENST00000460532 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
TCAF1-203ENST00000460532 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
TCAF1-203ENST00000460532 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
TCAF1-203ENST00000460532 CFTRP13569 1480 aa17.69■□□□□ 0.42
TCAF1-203ENST00000460532 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
TCAF1-203ENST00000460532 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
TCAF1-203ENST00000460532 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
TCAF1-203ENST00000460532 CUX2O14529 1486 aa17.64■□□□□ 0.41
TCAF1-203ENST00000460532 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
TCAF1-203ENST00000460532 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
TCAF1-203ENST00000460532 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
TCAF1-203ENST00000460532 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
TCAF1-203ENST00000460532 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
TCAF1-203ENST00000460532 WDR62O43379 1518 aa17.48■□□□□ 0.39
TCAF1-203ENST00000460532 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
TCAF1-203ENST00000460532 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
TCAF1-203ENST00000460532 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
TCAF1-203ENST00000460532 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
TCAF1-203ENST00000460532 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
TCAF1-203ENST00000460532 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
TCAF1-203ENST00000460532 CUX1P39880 1505 aa17.14■□□□□ 0.33
TCAF1-203ENST00000460532 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
TCAF1-203ENST00000460532 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
TCAF1-203ENST00000460532 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
TCAF1-203ENST00000460532 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
TCAF1-203ENST00000460532 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
TCAF1-203ENST00000460532 SOGA1O94964 1423 aa17.06■□□□□ 0.32
TCAF1-203ENST00000460532 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
TCAF1-203ENST00000460532 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
TCAF1-203ENST00000460532 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
TCAF1-203ENST00000460532 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
TCAF1-203ENST00000460532 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
TCAF1-203ENST00000460532 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
TCAF1-203ENST00000460532 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
TCAF1-203ENST00000460532 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
TCAF1-203ENST00000460532 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
TCAF1-203ENST00000460532 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
TCAF1-203ENST00000460532 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
TCAF1-203ENST00000460532 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
TCAF1-203ENST00000460532 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
TCAF1-203ENST00000460532 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
TCAF1-203ENST00000460532 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
TCAF1-203ENST00000460532 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
TCAF1-203ENST00000460532 CHD1O14646 1710 aa16.85■□□□□ 0.29
TCAF1-203ENST00000460532 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
TCAF1-203ENST00000460532 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
TCAF1-203ENST00000460532 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
TCAF1-203ENST00000460532 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
TCAF1-203ENST00000460532 FBLN2P98095 1184 aa16.72■□□□□ 0.27
TCAF1-203ENST00000460532 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
TCAF1-203ENST00000460532 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
TCAF1-203ENST00000460532 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
TCAF1-203ENST00000460532 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
TCAF1-203ENST00000460532 CUL7Q14999 1698 aa16.65■□□□□ 0.26
TCAF1-203ENST00000460532 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
TCAF1-203ENST00000460532 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
TCAF1-203ENST00000460532 IGF1RP08069 1367 aa16.63■□□□□ 0.25
TCAF1-203ENST00000460532 NUP160Q12769 1436 aa16.6■□□□□ 0.25
TCAF1-203ENST00000460532 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
TCAF1-203ENST00000460532 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
TCAF1-203ENST00000460532 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
TCAF1-203ENST00000460532 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
TCAF1-203ENST00000460532 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
TCAF1-203ENST00000460532 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
TCAF1-203ENST00000460532 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
TCAF1-203ENST00000460532 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
TCAF1-203ENST00000460532 EEA1Q15075 1411 aa16.45■□□□□ 0.22
TCAF1-203ENST00000460532 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms