RNA–Protein interactions for RNA: ENST00000392900.3

TCAF1-202, Transcript of TRPM8 channel associated factor 1, humanhuman

TSL 2

Gene TCAF1, Length 2,513 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-202ENST00000392900 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
TCAF1-202ENST00000392900 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
TCAF1-202ENST00000392900 ABCC9O60706 1549 aa23.06■■□□□ 1.28
TCAF1-202ENST00000392900 ZCCHC6Q5VYS8 1495 aaKnown RBP22.95■■□□□ 1.26
TCAF1-202ENST00000392900 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.24
TCAF1-202ENST00000392900 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
TCAF1-202ENST00000392900 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
TCAF1-202ENST00000392900 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
TCAF1-202ENST00000392900 NACADO15069 1562 aa22.36■■□□□ 1.17
TCAF1-202ENST00000392900 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
TCAF1-202ENST00000392900 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
TCAF1-202ENST00000392900 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
TCAF1-202ENST00000392900 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
TCAF1-202ENST00000392900 PABPN1Q86U42 306 aaKnown RBP eCLIP21.74■■□□□ 1.07
TCAF1-202ENST00000392900 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
TCAF1-202ENST00000392900 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
TCAF1-202ENST00000392900 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
TCAF1-202ENST00000392900 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
TCAF1-202ENST00000392900 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
TCAF1-202ENST00000392900 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
TCAF1-202ENST00000392900 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
TCAF1-202ENST00000392900 WIZO95785 1651 aa21.04■□□□□ 0.96
TCAF1-202ENST00000392900 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
TCAF1-202ENST00000392900 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
TCAF1-202ENST00000392900 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
TCAF1-202ENST00000392900 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.93
TCAF1-202ENST00000392900 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
TCAF1-202ENST00000392900 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
TCAF1-202ENST00000392900 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
TCAF1-202ENST00000392900 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
TCAF1-202ENST00000392900 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
TCAF1-202ENST00000392900 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
TCAF1-202ENST00000392900 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
TCAF1-202ENST00000392900 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
TCAF1-202ENST00000392900 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
TCAF1-202ENST00000392900 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
TCAF1-202ENST00000392900 HRCP23327 699 aa20.57■□□□□ 0.88
TCAF1-202ENST00000392900 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
TCAF1-202ENST00000392900 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.87
TCAF1-202ENST00000392900 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
TCAF1-202ENST00000392900 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
TCAF1-202ENST00000392900 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
TCAF1-202ENST00000392900 NESP48681 1621 aa20.2■□□□□ 0.82
TCAF1-202ENST00000392900 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
TCAF1-202ENST00000392900 CFTRP13569 1480 aa20.17■□□□□ 0.82
TCAF1-202ENST00000392900 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
TCAF1-202ENST00000392900 SOGA1O94964 1423 aa20■□□□□ 0.79
TCAF1-202ENST00000392900 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
TCAF1-202ENST00000392900 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
TCAF1-202ENST00000392900 FANCD2Q9BXW9 1451 aa19.94■□□□□ 0.78
TCAF1-202ENST00000392900 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
TCAF1-202ENST00000392900 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
TCAF1-202ENST00000392900 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.78
TCAF1-202ENST00000392900 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
TCAF1-202ENST00000392900 CUX1P39880 1505 aa19.85■□□□□ 0.77
TCAF1-202ENST00000392900 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
TCAF1-202ENST00000392900 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.77
TCAF1-202ENST00000392900 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
TCAF1-202ENST00000392900 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
TCAF1-202ENST00000392900 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
TCAF1-202ENST00000392900 UBTFP17480 764 aaKnown RBP19.79■□□□□ 0.76
TCAF1-202ENST00000392900 EEA1Q15075 1411 aa19.77■□□□□ 0.76
TCAF1-202ENST00000392900 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
TCAF1-202ENST00000392900 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
TCAF1-202ENST00000392900 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
TCAF1-202ENST00000392900 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
TCAF1-202ENST00000392900 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
TCAF1-202ENST00000392900 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
TCAF1-202ENST00000392900 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
TCAF1-202ENST00000392900 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
TCAF1-202ENST00000392900 MYT1Q01538 1121 aa19.68■□□□□ 0.74
TCAF1-202ENST00000392900 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
TCAF1-202ENST00000392900 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
TCAF1-202ENST00000392900 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
TCAF1-202ENST00000392900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
TCAF1-202ENST00000392900 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
TCAF1-202ENST00000392900 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
TCAF1-202ENST00000392900 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
TCAF1-202ENST00000392900 WDR62O43379 1518 aa19.56■□□□□ 0.72
TCAF1-202ENST00000392900 KIF21BO75037 1637 aa19.55■□□□□ 0.72
TCAF1-202ENST00000392900 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
TCAF1-202ENST00000392900 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
TCAF1-202ENST00000392900 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
TCAF1-202ENST00000392900 CUX2O14529 1486 aa19.52■□□□□ 0.71
TCAF1-202ENST00000392900 CLIP1P30622 1438 aa19.47■□□□□ 0.71
TCAF1-202ENST00000392900 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
TCAF1-202ENST00000392900 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
TCAF1-202ENST00000392900 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
TCAF1-202ENST00000392900 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
TCAF1-202ENST00000392900 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
TCAF1-202ENST00000392900 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
TCAF1-202ENST00000392900 VPS8Q8N3P4 1428 aa19.35■□□□□ 0.69
TCAF1-202ENST00000392900 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
TCAF1-202ENST00000392900 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
TCAF1-202ENST00000392900 IGF1RP08069 1367 aa19.32■□□□□ 0.68
TCAF1-202ENST00000392900 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
TCAF1-202ENST00000392900 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
TCAF1-202ENST00000392900 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
TCAF1-202ENST00000392900 APLP2Q06481 763 aa19.27■□□□□ 0.68
TCAF1-202ENST00000392900 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms