Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.53■□□□□ 0.4
VEGFDO43915 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.53■□□□□ 0.4
VEGFDO43915 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.53■□□□□ 0.4
VEGFDO43915 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.53■□□□□ 0.4
VEGFDO43915 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
VEGFDO43915 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.53■□□□□ 0.4
VEGFDO43915 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VEGFDO43915 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.52■□□□□ 0.4
VEGFDO43915 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.52■□□□□ 0.4
VEGFDO43915 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.52■□□□□ 0.4
VEGFDO43915 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.52■□□□□ 0.4
VEGFDO43915 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.52■□□□□ 0.4
VEGFDO43915 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 AL732292.2-201ENST00000609649 430 ntBASIC17.52■□□□□ 0.4
VEGFDO43915 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 AL691432.3-201ENST00000621860 400 ntBASIC17.52■□□□□ 0.4
VEGFDO43915 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.52■□□□□ 0.4
VEGFDO43915 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VEGFDO43915 AC010460.3-201ENST00000511359 1579 ntBASIC17.52■□□□□ 0.39
VEGFDO43915 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 BX276092.7-203ENST00000637198 1536 ntBASIC17.52■□□□□ 0.39
VEGFDO43915 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VEGFDO43915 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VEGFDO43915 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 AC009949.1-201ENST00000623048 1830 ntBASIC17.51■□□□□ 0.39
VEGFDO43915 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
VEGFDO43915 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.51■□□□□ 0.39
VEGFDO43915 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.51■□□□□ 0.39
VEGFDO43915 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.51■□□□□ 0.39
VEGFDO43915 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.51■□□□□ 0.39
VEGFDO43915 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.51■□□□□ 0.39
VEGFDO43915 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VEGFDO43915 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.5■□□□□ 0.39
VEGFDO43915 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
VEGFDO43915 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.5■□□□□ 0.39
VEGFDO43915 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VEGFDO43915 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.5■□□□□ 0.39
VEGFDO43915 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VEGFDO43915 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms