Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 DUX4L9-201ENST00000449051 1259 ntBASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS1Q9Y6A9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SNX18-202ENST00000343017 3140 ntBASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SDHAP1-207ENST00000440850 2000 ntBASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 AC241377.3-202ENST00000626088 1088 ntBASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 AC241585.3-202ENST00000628937 1088 ntBASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 AC245100.8-202ENST00000629247 1058 ntBASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS1Q9Y6A9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SPCS1Q9Y6A9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.23□□□□□ -0.45
SPCS1Q9Y6A9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPCS1Q9Y6A9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms