Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB9Q9Y5E1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 KRT18P65-201ENST00000439811 1286 ntBASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 AC139530.3-201ENST00000620344 690 ntBASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 AC009154.2-201ENST00000621177 724 ntBASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 AC124864.1-201ENST00000623408 392 ntBASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB9Q9Y5E1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 PMS2P1-201ENST00000431037 1228 ntBASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 KRT16P4-201ENST00000453883 522 ntBASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 AL592071.1-201ENST00000611956 408 ntBASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB9Q9Y5E1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 RN7SL606P-201ENST00000472779 293 ntBASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 VENTXP7-201ENST00000475503 772 ntBASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 HLA-A-201ENST00000376802 1334 ntBASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB9Q9Y5E1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB9Q9Y5E1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms