RNA–Protein interactions for RNA: ENST00000448552.6

CHTF8-203, Transcript of chromosome transmission fidelity factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHTF8, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF8-203ENST00000448552 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
CHTF8-203ENST00000448552 CCDC180Q9P1Z9 1646 aa36.51■■■■□ 3.44
CHTF8-203ENST00000448552 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
CHTF8-203ENST00000448552 DCAF1Q9Y4B6 1507 aa34.6■■■■□ 3.13
CHTF8-203ENST00000448552 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
CHTF8-203ENST00000448552 ABCC9O60706 1549 aa34.12■■■■□ 3.05
CHTF8-203ENST00000448552 NACADO15069 1562 aa33.92■■■■□ 3.02
CHTF8-203ENST00000448552 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
CHTF8-203ENST00000448552 RB1CC1Q8TDY2 1594 aa33.59■■■□□ 2.97
CHTF8-203ENST00000448552 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
CHTF8-203ENST00000448552 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
CHTF8-203ENST00000448552 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.86
CHTF8-203ENST00000448552 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
CHTF8-203ENST00000448552 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
CHTF8-203ENST00000448552 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
CHTF8-203ENST00000448552 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
CHTF8-203ENST00000448552 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
CHTF8-203ENST00000448552 MROH2BQ7Z745 1585 aa32.03■■■□□ 2.72
CHTF8-203ENST00000448552 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
CHTF8-203ENST00000448552 SMARCA4P51532 1647 aa32.01■■■□□ 2.71
CHTF8-203ENST00000448552 WIZO95785 1651 aa31.78■■■□□ 2.68
CHTF8-203ENST00000448552 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
CHTF8-203ENST00000448552 TOP2AP11388 1531 aaKnown RBP31.57■■■□□ 2.64
CHTF8-203ENST00000448552 EIF4G1Q04637 1599 aaKnown RBP31.54■■■□□ 2.64
CHTF8-203ENST00000448552 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
CHTF8-203ENST00000448552 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
CHTF8-203ENST00000448552 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
CHTF8-203ENST00000448552 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
CHTF8-203ENST00000448552 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
CHTF8-203ENST00000448552 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
CHTF8-203ENST00000448552 CC2D2AQ9P2K1 1620 aa31.06■■■□□ 2.56
CHTF8-203ENST00000448552 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
CHTF8-203ENST00000448552 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
CHTF8-203ENST00000448552 CFTRP13569 1480 aa30.51■■■□□ 2.47
CHTF8-203ENST00000448552 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
CHTF8-203ENST00000448552 CADPSQ9ULU8 1353 aa30.33■■■□□ 2.45
CHTF8-203ENST00000448552 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
CHTF8-203ENST00000448552 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
CHTF8-203ENST00000448552 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
CHTF8-203ENST00000448552 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
CHTF8-203ENST00000448552 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
CHTF8-203ENST00000448552 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
CHTF8-203ENST00000448552 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
CHTF8-203ENST00000448552 CUX1P39880 1505 aa29.99■■■□□ 2.39
CHTF8-203ENST00000448552 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
CHTF8-203ENST00000448552 NESP48681 1621 aa29.97■■■□□ 2.39
CHTF8-203ENST00000448552 EEA1Q15075 1411 aa29.93■■■□□ 2.38
CHTF8-203ENST00000448552 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
CHTF8-203ENST00000448552 CEP164Q9UPV0 1460 aa29.83■■■□□ 2.37
CHTF8-203ENST00000448552 DNMBPQ6XZF7 1577 aa29.83■■■□□ 2.37
CHTF8-203ENST00000448552 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
CHTF8-203ENST00000448552 SOGA1O94964 1423 aa29.75■■■□□ 2.35
CHTF8-203ENST00000448552 TOPBP1Q92547 1522 aa29.69■■■□□ 2.34
CHTF8-203ENST00000448552 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
CHTF8-203ENST00000448552 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
CHTF8-203ENST00000448552 RUSC2Q8N2Y8 1516 aa29.63■■■□□ 2.33
CHTF8-203ENST00000448552 KIF21BO75037 1637 aa29.57■■■□□ 2.32
CHTF8-203ENST00000448552 FAM9AQ8IZU1 332 aaPredicted RBP29.55■■■□□ 2.32
CHTF8-203ENST00000448552 MRC2Q9UBG0 1479 aa29.53■■■□□ 2.32
CHTF8-203ENST00000448552 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
CHTF8-203ENST00000448552 CSRNP3Q8WYN3 585 aa29.53■■■□□ 2.32
CHTF8-203ENST00000448552 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
CHTF8-203ENST00000448552 KIF27Q86VH2 1401 aa29.5■■■□□ 2.31
CHTF8-203ENST00000448552 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
CHTF8-203ENST00000448552 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
CHTF8-203ENST00000448552 WDR62O43379 1518 aa29.46■■■□□ 2.31
CHTF8-203ENST00000448552 GOLGA3Q08378 1498 aa29.4■■■□□ 2.3
CHTF8-203ENST00000448552 ERICH3Q5RHP9 1530 aa29.39■■■□□ 2.3
CHTF8-203ENST00000448552 THOC2Q8NI27 1593 aaKnown RBP29.38■■■□□ 2.29
CHTF8-203ENST00000448552 CUX2O14529 1486 aa29.37■■■□□ 2.29
CHTF8-203ENST00000448552 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
CHTF8-203ENST00000448552 TARBP1Q13395 1621 aaKnown RBP29.35■■■□□ 2.29
CHTF8-203ENST00000448552 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
CHTF8-203ENST00000448552 TNIKQ9UKE5 1360 aa29.3■■■□□ 2.28
CHTF8-203ENST00000448552 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
CHTF8-203ENST00000448552 ABCA5Q8WWZ7 1642 aa29.3■■■□□ 2.28
CHTF8-203ENST00000448552 IGF1RP08069 1367 aa29.22■■■□□ 2.27
CHTF8-203ENST00000448552 CUL7Q14999 1698 aa29.21■■■□□ 2.27
CHTF8-203ENST00000448552 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
CHTF8-203ENST00000448552 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
CHTF8-203ENST00000448552 GAPVD1Q14C86 1478 aa29.09■■■□□ 2.25
CHTF8-203ENST00000448552 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
CHTF8-203ENST00000448552 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
CHTF8-203ENST00000448552 CARMIL1Q5VZK9 1371 aa29.04■■■□□ 2.24
CHTF8-203ENST00000448552 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
CHTF8-203ENST00000448552 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
CHTF8-203ENST00000448552 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
CHTF8-203ENST00000448552 GRIN2BQ13224 1484 aa28.92■■■□□ 2.22
CHTF8-203ENST00000448552 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
CHTF8-203ENST00000448552 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
CHTF8-203ENST00000448552 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
CHTF8-203ENST00000448552 CTTNBP2Q8WZ74 1663 aa28.85■■■□□ 2.21
CHTF8-203ENST00000448552 CLIP1P30622 1438 aa28.85■■■□□ 2.21
CHTF8-203ENST00000448552 AQRO60306 1485 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHTF8-203ENST00000448552 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
CHTF8-203ENST00000448552 MAGI1Q96QZ7 1491 aaPredicted RBP28.74■■■□□ 2.19
CHTF8-203ENST00000448552 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
CHTF8-203ENST00000448552 VPS8Q8N3P4 1428 aa28.65■■■□□ 2.18
CHTF8-203ENST00000448552 EFCAB5A4FU69 1503 aa28.65■■■□□ 2.18
CHTF8-203ENST00000448552 ARAP1Q96P48 1450 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms