Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM7Q9C029 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM7Q9C029 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM7Q9C029 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM7Q9C029 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM7Q9C029 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM7Q9C029 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM7Q9C029 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 AC012306.2-201ENST00000609350 630 ntBASIC19.14■□□□□ 0.65
TRIM7Q9C029 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.65
TRIM7Q9C029 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM7Q9C029 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM7Q9C029 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 AC133561.5-201ENST00000635547 218 ntBASIC19.13■□□□□ 0.65
TRIM7Q9C029 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM7Q9C029 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM7Q9C029 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.12■□□□□ 0.65
TRIM7Q9C029 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM7Q9C029 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM7Q9C029 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM7Q9C029 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM7Q9C029 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM7Q9C029 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM7Q9C029 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM7Q9C029 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM7Q9C029 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM7Q9C029 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM7Q9C029 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms