Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPIPA3F8WFD2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA3F8WFD2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.39■□□□□ 0.22
NPIPA3F8WFD2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPIPA3F8WFD2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPIPA3F8WFD2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 AC009113.1-201ENST00000570267 2443 ntBASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NPIPA3F8WFD2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 IGHV3-47-201ENST00000425060 335 ntBASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 MINOS1P3-201ENST00000457048 203 ntBASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA3F8WFD2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms