RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 NISCHQ9Y2I1 1504 aa42.18■■■■■ 4.34
GSDMD-201ENST00000262580 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
GSDMD-201ENST00000262580 ZCCHC6Q5VYS8 1495 aaKnown RBP35.44■■■■□ 3.26
GSDMD-201ENST00000262580 ABCC9O60706 1549 aa34.99■■■■□ 3.19
GSDMD-201ENST00000262580 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
GSDMD-201ENST00000262580 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
GSDMD-201ENST00000262580 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
GSDMD-201ENST00000262580 NACADO15069 1562 aa34.34■■■■□ 3.09
GSDMD-201ENST00000262580 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
GSDMD-201ENST00000262580 RB1CC1Q8TDY2 1594 aa34.09■■■■□ 3.05
GSDMD-201ENST00000262580 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
GSDMD-201ENST00000262580 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
GSDMD-201ENST00000262580 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
GSDMD-201ENST00000262580 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.865e-7■■■■■ 27.2
GSDMD-201ENST00000262580 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
GSDMD-201ENST00000262580 CECR2Q9BXF3 1484 aa32.81■■■□□ 2.84
GSDMD-201ENST00000262580 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
GSDMD-201ENST00000262580 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
GSDMD-201ENST00000262580 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
GSDMD-201ENST00000262580 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
GSDMD-201ENST00000262580 WIZO95785 1651 aa32.36■■■□□ 2.77
GSDMD-201ENST00000262580 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
GSDMD-201ENST00000262580 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.73
GSDMD-201ENST00000262580 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
GSDMD-201ENST00000262580 ATAD2BQ9ULI0 1458 aa31.95■■■□□ 2.71
GSDMD-201ENST00000262580 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
GSDMD-201ENST00000262580 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
GSDMD-201ENST00000262580 CC2D2AQ9P2K1 1620 aa31.68■■■□□ 2.66
GSDMD-201ENST00000262580 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
GSDMD-201ENST00000262580 HMGXB3Q12766 1538 aa31.66■■■□□ 2.66
GSDMD-201ENST00000262580 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
GSDMD-201ENST00000262580 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
GSDMD-201ENST00000262580 ABCC8Q09428 1581 aa30.99■■■□□ 2.55
GSDMD-201ENST00000262580 CFTRP13569 1480 aa30.95■■■□□ 2.55
GSDMD-201ENST00000262580 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
GSDMD-201ENST00000262580 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
GSDMD-201ENST00000262580 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
GSDMD-201ENST00000262580 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
GSDMD-201ENST00000262580 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
GSDMD-201ENST00000262580 NESP48681 1621 aa30.69■■■□□ 2.5
GSDMD-201ENST00000262580 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
GSDMD-201ENST00000262580 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
GSDMD-201ENST00000262580 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
GSDMD-201ENST00000262580 TOP2BQ02880 1626 aa30.54■■■□□ 2.48
GSDMD-201ENST00000262580 BIVM-ERCC5R4GMW8 1640 aa30.54■■■□□ 2.48
GSDMD-201ENST00000262580 CUX1P39880 1505 aa30.51■■■□□ 2.47
GSDMD-201ENST00000262580 FAM9AQ8IZU1 332 aaPredicted RBP30.39■■■□□ 2.46
GSDMD-201ENST00000262580 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
GSDMD-201ENST00000262580 PDS5BQ9NTI5 1447 aa30.37■■■□□ 2.45
GSDMD-201ENST00000262580 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
GSDMD-201ENST00000262580 SOGA1O94964 1423 aa30.34■■■□□ 2.45
GSDMD-201ENST00000262580 DNMBPQ6XZF7 1577 aa30.27■■■□□ 2.44
GSDMD-201ENST00000262580 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
GSDMD-201ENST00000262580 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
GSDMD-201ENST00000262580 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
GSDMD-201ENST00000262580 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.42
GSDMD-201ENST00000262580 EEA1Q15075 1411 aa30.19■■■□□ 2.42
GSDMD-201ENST00000262580 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
GSDMD-201ENST00000262580 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
GSDMD-201ENST00000262580 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
GSDMD-201ENST00000262580 CSRNP3Q8WYN3 585 aa30.02■■■□□ 2.4
GSDMD-201ENST00000262580 EHMT2Q96KQ7 1210 aa30■■■□□ 2.39
GSDMD-201ENST00000262580 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
GSDMD-201ENST00000262580 RAD54L2Q9Y4B4 1467 aa29.97■■■□□ 2.39
GSDMD-201ENST00000262580 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
GSDMD-201ENST00000262580 CUX2O14529 1486 aa29.95■■■□□ 2.38
GSDMD-201ENST00000262580 WDR62O43379 1518 aa29.91■■■□□ 2.38
GSDMD-201ENST00000262580 ABCA10Q8WWZ4 1543 aa29.89■■■□□ 2.38
GSDMD-201ENST00000262580 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
GSDMD-201ENST00000262580 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
GSDMD-201ENST00000262580 KIF21BO75037 1637 aa29.88■■■□□ 2.37
GSDMD-201ENST00000262580 GOLGA3Q08378 1498 aa29.81■■■□□ 2.36
GSDMD-201ENST00000262580 TARBP1Q13395 1621 aaKnown RBP29.79■■■□□ 2.36
GSDMD-201ENST00000262580 PRXQ9BXM0 1461 aa29.75■■■□□ 2.35
GSDMD-201ENST00000262580 RAPGEF2Q9Y4G8 1499 aa29.73■■■□□ 2.35
GSDMD-201ENST00000262580 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
GSDMD-201ENST00000262580 IGF1RP08069 1367 aa29.69■■■□□ 2.34
GSDMD-201ENST00000262580 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
GSDMD-201ENST00000262580 TNIKQ9UKE5 1360 aa29.65■■■□□ 2.34
GSDMD-201ENST00000262580 TDRD9Q8NDG6 1382 aaKnown RBP29.65■■■□□ 2.34
GSDMD-201ENST00000262580 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
GSDMD-201ENST00000262580 UBTFP17480 764 aaKnown RBP29.62■■■□□ 2.33
GSDMD-201ENST00000262580 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
GSDMD-201ENST00000262580 CARMIL1Q5VZK9 1371 aa29.55■■■□□ 2.32
GSDMD-201ENST00000262580 CUL7Q14999 1698 aa29.54■■■□□ 2.32
GSDMD-201ENST00000262580 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
GSDMD-201ENST00000262580 CEP162Q5TB80 1403 aa29.53■■■□□ 2.32
GSDMD-201ENST00000262580 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
GSDMD-201ENST00000262580 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
GSDMD-201ENST00000262580 EIF4G3O43432 1585 aaKnown RBP29.45■■■□□ 2.3
GSDMD-201ENST00000262580 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
GSDMD-201ENST00000262580 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
GSDMD-201ENST00000262580 CLIP1P30622 1438 aa29.32■■■□□ 2.28
GSDMD-201ENST00000262580 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
GSDMD-201ENST00000262580 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
GSDMD-201ENST00000262580 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
GSDMD-201ENST00000262580 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
GSDMD-201ENST00000262580 MAGI1Q96QZ7 1491 aaPredicted RBP29.16■■■□□ 2.26
GSDMD-201ENST00000262580 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
GSDMD-201ENST00000262580 ARAP1Q96P48 1450 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms