Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AL359258.3-201ENST00000622910 2331 ntBASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
LINC01558Q9Y6Z2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AC087741.3-201ENST00000624270 1347 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 DKFZP434A062-201ENST00000573103 5021 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 KRT8P17-201ENST00000453110 1448 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 OR2I1P-210ENST00000642037 4691 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 SNX18-202ENST00000343017 3140 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AC092171.3-201ENST00000610122 2651 ntBASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC9.31□□□□□ -0.92
LINC01558Q9Y6Z2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
LINC01558Q9Y6Z2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms