Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 LINC01711-201ENST00000598340 967 ntBASIC16.28■□□□□ 0.2
RTL6Q6ICC9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.28■□□□□ 0.2
RTL6Q6ICC9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 HTR7P1-202ENST00000624664 4411 ntBASIC16.27■□□□□ 0.2
RTL6Q6ICC9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 KRT16P4-201ENST00000453883 522 ntBASIC16.27■□□□□ 0.2
RTL6Q6ICC9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 AL160237.2-201ENST00000556165 472 ntBASIC16.27■□□□□ 0.2
RTL6Q6ICC9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 WIZP1-201ENST00000531444 2299 ntBASIC16.27■□□□□ 0.2
RTL6Q6ICC9 AL390961.4-201ENST00000623958 2535 ntBASIC16.27■□□□□ 0.2
RTL6Q6ICC9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTL6Q6ICC9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 AC009102.3-201ENST00000623118 1491 ntBASIC16.27■□□□□ 0.19
RTL6Q6ICC9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.19
RTL6Q6ICC9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 VENTXP7-201ENST00000475503 772 ntBASIC16.26■□□□□ 0.19
RTL6Q6ICC9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 AC011840.4-201ENST00000578471 627 ntBASIC16.26■□□□□ 0.19
RTL6Q6ICC9 AL353801.3-201ENST00000609898 542 ntBASIC16.26■□□□□ 0.19
RTL6Q6ICC9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTL6Q6ICC9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms