Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM3O75382 AL136038.4-201ENST00000603606 1261 ntBASIC16.84■□□□□ 0.29
TRIM3O75382 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 AC116407.4-201ENST00000623319 1061 ntBASIC16.84■□□□□ 0.29
TRIM3O75382 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM3O75382 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM3O75382 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM3O75382 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM3O75382 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM3O75382 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM3O75382 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM3O75382 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRIM3O75382 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM3O75382 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM3O75382 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 IER3-202ENST00000376377 1350 ntBASIC16.83■□□□□ 0.28
TRIM3O75382 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRIM3O75382 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM3O75382 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM3O75382 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 AC009065.1-201ENST00000564055 1225 ntBASIC16.83■□□□□ 0.28
TRIM3O75382 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM3O75382 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRIM3O75382 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM3O75382 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRIM3O75382 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM3O75382 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 PVRIG2P-201ENST00000435460 978 ntBASIC16.82■□□□□ 0.28
TRIM3O75382 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM3O75382 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM3O75382 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM3O75382 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM3O75382 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM3O75382 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 AL163051.1-201ENST00000569214 1512 ntBASIC16.81■□□□□ 0.28
TRIM3O75382 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM3O75382 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms