Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 HLA-F-220ENST00000434407 884 ntBASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 AC063952.2-201ENST00000498792 1227 ntBASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRMS1Q9HCU9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 KRT18P48-201ENST00000434763 852 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 AC112907.2-201ENST00000448639 330 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 KRT18P38-201ENST00000449496 1282 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 DUX4L26-201ENST00000489078 1255 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 AC113404.2-201ENST00000507884 177 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 KRT18P21-201ENST00000515767 1272 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 AC022616.7-201ENST00000525383 220 ntBASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRMS1Q9HCU9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 AC092597.1-201ENST00000487352 616 ntBASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRMS1Q9HCU9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 ZNF444P1-201ENST00000559497 298 ntBASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.83■□□□□ 0.93
BRMS1Q9HCU9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BRMS1Q9HCU9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BRMS1Q9HCU9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms