Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD97P48960 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD97P48960 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CD97P48960 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.36■□□□□ 0.37
CD97P48960 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD97P48960 LINC01126-201ENST00000623515 1646 ntBASIC17.36■□□□□ 0.37
CD97P48960 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD97P48960 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD97P48960 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.36■□□□□ 0.37
CD97P48960 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CD97P48960 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.35■□□□□ 0.37
CD97P48960 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.35■□□□□ 0.37
CD97P48960 RASA4DP-201ENST00000460726 1199 ntBASIC17.35■□□□□ 0.37
CD97P48960 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD97P48960 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.35■□□□□ 0.37
CD97P48960 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD97P48960 CICP6-201ENST00000457191 2729 ntBASIC17.34■□□□□ 0.37
CD97P48960 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CD97P48960 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CD97P48960 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.34■□□□□ 0.37
CD97P48960 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.34■□□□□ 0.37
CD97P48960 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.34■□□□□ 0.37
CD97P48960 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD97P48960 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.34■□□□□ 0.37
CD97P48960 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CD97P48960 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD97P48960 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.34■□□□□ 0.37
CD97P48960 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CD97P48960 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.33■□□□□ 0.37
CD97P48960 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.33■□□□□ 0.37
CD97P48960 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD97P48960 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms