Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SOX30O94993 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX30O94993 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX30O94993 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.83■□□□□ 0.29
SOX30O94993 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX30O94993 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX30O94993 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX30O94993 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX30O94993 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 AC010203.1-204ENST00000548782 407 ntBASIC16.83■□□□□ 0.28
SOX30O94993 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX30O94993 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX30O94993 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SOX30O94993 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX30O94993 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX30O94993 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX30O94993 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SOX30O94993 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
SOX30O94993 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.82■□□□□ 0.28
SOX30O94993 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 RNF152P1-201ENST00000397754 604 ntBASIC16.82■□□□□ 0.28
SOX30O94993 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SOX30O94993 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.82■□□□□ 0.28
SOX30O94993 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.82■□□□□ 0.28
SOX30O94993 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SOX30O94993 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 AL590326.2-201ENST00000625139 305 ntBASIC16.82■□□□□ 0.28
SOX30O94993 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.82■□□□□ 0.28
SOX30O94993 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SOX30O94993 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX30O94993 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SOX30O94993 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX30O94993 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX30O94993 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SOX30O94993 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
SOX30O94993 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX30O94993 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX30O94993 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX30O94993 HLA-F-220ENST00000434407 884 ntBASIC16.81■□□□□ 0.28
SOX30O94993 YBX1P2-201ENST00000489612 999 ntBASIC16.81■□□□□ 0.28
SOX30O94993 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SOX30O94993 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms