Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 BX276092.5-203ENST00000456199 560 ntBASIC20.97■□□□□ 0.95
RBM28Q9NW13 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBM28Q9NW13 AP000997.3-201ENST00000623333 2250 ntBASIC20.97■□□□□ 0.95
RBM28Q9NW13 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.97■□□□□ 0.95
RBM28Q9NW13 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 GUSBP12-201ENST00000513727 720 ntBASIC20.96■□□□□ 0.95
RBM28Q9NW13 AC090616.6-201ENST00000582640 721 ntBASIC20.96■□□□□ 0.95
RBM28Q9NW13 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.96■□□□□ 0.95
RBM28Q9NW13 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBM28Q9NW13 NOC2LP1-202ENST00000452600 2235 ntBASIC20.96■□□□□ 0.95
RBM28Q9NW13 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RBM28Q9NW13 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBM28Q9NW13 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RBM28Q9NW13 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms