Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.94■■■□□ 2.7
PDZRN3Q9UPQ7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.94■■■□□ 2.7
PDZRN3Q9UPQ7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PDZRN3Q9UPQ7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PDZRN3Q9UPQ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
PDZRN3Q9UPQ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PDZRN3Q9UPQ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.93■■■□□ 2.7
PDZRN3Q9UPQ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.92■■■□□ 2.7
PDZRN3Q9UPQ7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDZRN3Q9UPQ7 BX255925.1-201ENST00000566954 1854 ntBASIC31.92■■■□□ 2.7
PDZRN3Q9UPQ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDZRN3Q9UPQ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
PDZRN3Q9UPQ7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PDZRN3Q9UPQ7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PDZRN3Q9UPQ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDZRN3Q9UPQ7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDZRN3Q9UPQ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.9■■■□□ 2.7
PDZRN3Q9UPQ7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PDZRN3Q9UPQ7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PDZRN3Q9UPQ7 RARRES2P1-201ENST00000474487 481 ntBASIC31.89■■■□□ 2.7
PDZRN3Q9UPQ7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.89■■■□□ 2.7
PDZRN3Q9UPQ7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PDZRN3Q9UPQ7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PDZRN3Q9UPQ7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PDZRN3Q9UPQ7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
PDZRN3Q9UPQ7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
PDZRN3Q9UPQ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PDZRN3Q9UPQ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PDZRN3Q9UPQ7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDZRN3Q9UPQ7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDZRN3Q9UPQ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDZRN3Q9UPQ7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PDZRN3Q9UPQ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDZRN3Q9UPQ7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PDZRN3Q9UPQ7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PDZRN3Q9UPQ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PDZRN3Q9UPQ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.84■■■□□ 2.69
PDZRN3Q9UPQ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
PDZRN3Q9UPQ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDZRN3Q9UPQ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDZRN3Q9UPQ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDZRN3Q9UPQ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.83■■■□□ 2.69
PDZRN3Q9UPQ7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.83■■■□□ 2.69
PDZRN3Q9UPQ7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.82■■■□□ 2.68
PDZRN3Q9UPQ7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDZRN3Q9UPQ7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.82■■■□□ 2.68
PDZRN3Q9UPQ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
PDZRN3Q9UPQ7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PDZRN3Q9UPQ7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDZRN3Q9UPQ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PDZRN3Q9UPQ7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDZRN3Q9UPQ7 LINC01003-201ENST00000564834 1764 ntBASIC31.8■■■□□ 2.68
PDZRN3Q9UPQ7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDZRN3Q9UPQ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDZRN3Q9UPQ7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PDZRN3Q9UPQ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
PDZRN3Q9UPQ7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PDZRN3Q9UPQ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDZRN3Q9UPQ7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDZRN3Q9UPQ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDZRN3Q9UPQ7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDZRN3Q9UPQ7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDZRN3Q9UPQ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDZRN3Q9UPQ7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
PDZRN3Q9UPQ7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
PDZRN3Q9UPQ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.75■■■□□ 2.67
PDZRN3Q9UPQ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PDZRN3Q9UPQ7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PDZRN3Q9UPQ7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDZRN3Q9UPQ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDZRN3Q9UPQ7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.74■■■□□ 2.67
PDZRN3Q9UPQ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.73■■■□□ 2.67
PDZRN3Q9UPQ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 AC007029.1-201ENST00000604183 313 ntBASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 AC129492.7-201ENST00000622992 756 ntBASIC31.72■■■□□ 2.67
PDZRN3Q9UPQ7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms