Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CDT1Q9H211 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDT1Q9H211 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.04■■□□□ 1.92
CDT1Q9H211 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDT1Q9H211 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDT1Q9H211 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDT1Q9H211 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CDT1Q9H211 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CDT1Q9H211 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDT1Q9H211 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDT1Q9H211 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDT1Q9H211 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDT1Q9H211 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.02■■□□□ 1.92
CDT1Q9H211 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDT1Q9H211 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDT1Q9H211 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDT1Q9H211 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDT1Q9H211 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDT1Q9H211 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.01■■□□□ 1.91
CDT1Q9H211 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDT1Q9H211 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27■■□□□ 1.91
CDT1Q9H211 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CDT1Q9H211 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
CDT1Q9H211 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
CDT1Q9H211 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDT1Q9H211 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
CDT1Q9H211 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
CDT1Q9H211 AC025884.2-201ENST00000553429 711 ntBASIC26.97■■□□□ 1.91
CDT1Q9H211 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDT1Q9H211 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.97■■□□□ 1.91
CDT1Q9H211 AL449106.1-201ENST00000608517 1980 ntBASIC26.96■■□□□ 1.91
CDT1Q9H211 SMPD5-203ENST00000639008 1464 ntBASIC26.95■■□□□ 1.91
CDT1Q9H211 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDT1Q9H211 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.95■■□□□ 1.9
CDT1Q9H211 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.94■■□□□ 1.9
CDT1Q9H211 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.94■■□□□ 1.9
CDT1Q9H211 AC007029.1-201ENST00000604183 313 ntBASIC26.94■■□□□ 1.9
CDT1Q9H211 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDT1Q9H211 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.94■■□□□ 1.9
CDT1Q9H211 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDT1Q9H211 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.93■■□□□ 1.9
CDT1Q9H211 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDT1Q9H211 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.93■■□□□ 1.9
CDT1Q9H211 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.93■■□□□ 1.9
CDT1Q9H211 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDT1Q9H211 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDT1Q9H211 AL359504.2-201ENST00000605506 1601 ntBASIC26.92■■□□□ 1.9
CDT1Q9H211 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDT1Q9H211 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CDT1Q9H211 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDT1Q9H211 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.91■■□□□ 1.9
CDT1Q9H211 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.91■■□□□ 1.9
CDT1Q9H211 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CDT1Q9H211 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDT1Q9H211 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDT1Q9H211 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CDT1Q9H211 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.9■■□□□ 1.9
CDT1Q9H211 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.9■■□□□ 1.9
CDT1Q9H211 U85056.1-201ENST00000616429 682 ntBASIC26.9■■□□□ 1.9
CDT1Q9H211 NTF6A-201ENST00000591175 560 ntBASIC26.89■■□□□ 1.9
CDT1Q9H211 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CDT1Q9H211 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDT1Q9H211 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.88■■□□□ 1.89
CDT1Q9H211 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDT1Q9H211 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CDT1Q9H211 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDT1Q9H211 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDT1Q9H211 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDT1Q9H211 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.86■■□□□ 1.89
CDT1Q9H211 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDT1Q9H211 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CDT1Q9H211 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDT1Q9H211 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.85■■□□□ 1.89
CDT1Q9H211 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDT1Q9H211 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.85■■□□□ 1.89
CDT1Q9H211 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.84■■□□□ 1.89
CDT1Q9H211 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDT1Q9H211 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CDT1Q9H211 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.84■■□□□ 1.89
CDT1Q9H211 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CDT1Q9H211 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDT1Q9H211 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDT1Q9H211 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CDT1Q9H211 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.82■■□□□ 1.88
CDT1Q9H211 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.82■■□□□ 1.88
CDT1Q9H211 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDT1Q9H211 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDT1Q9H211 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.81■■□□□ 1.88
CDT1Q9H211 RP9P-202ENST00000450133 1212 ntBASIC26.81■■□□□ 1.88
CDT1Q9H211 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.81■■□□□ 1.88
CDT1Q9H211 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDT1Q9H211 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDT1Q9H211 AC009831.1-201ENST00000580420 1582 ntBASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms