Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 DNHD1-220ENST00000534210 2867 ntTSL 1 (best)14.5□□□□□ -0.092e-10■■■■■ 42.3
XRN2Q9H0D6 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.272e-10■■■■■ 42.3
XRN2Q9H0D6 DNHD1-216ENST00000532027 4881 ntTSL 211.55□□□□□ -0.562e-10■■■■■ 42.3
XRN2Q9H0D6 DNHD1-219ENST00000533649 2557 ntTSL 1 (best)11.1□□□□□ -0.632e-10■■■■■ 42.3
XRN2Q9H0D6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.352e-10■■■■■ 42.3
XRN2Q9H0D6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.141e-6■■■■■ 42.2
XRN2Q9H0D6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.981e-6■■■■■ 42.2
XRN2Q9H0D6 CACNA1H-211ENST00000639478 7992 ntTSL 520.77■□□□□ 0.911e-6■■■■■ 42.2
XRN2Q9H0D6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.891e-6■■■■■ 42.2
XRN2Q9H0D6 CACNA1H-212ENST00000640028 7375 ntTSL 519.15■□□□□ 0.661e-6■■■■■ 42.2
XRN2Q9H0D6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.191e-6■■■■■ 42.2
XRN2Q9H0D6 RBMS1-211ENST00000477486 562 ntTSL 426.5■■□□□ 1.839e-7■■■■■ 42.1
XRN2Q9H0D6 RAB4A-203ENST00000481981 531 ntTSL 227■■□□□ 1.911e-10■■■■■ 42.1
XRN2Q9H0D6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.4■■□□□ 1.183e-7■■■■■ 42.1
XRN2Q9H0D6 RAB4A-202ENST00000473894 708 ntTSL 320.11■□□□□ 0.811e-10■■■■■ 42.1
XRN2Q9H0D6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.21■□□□□ 0.673e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-206ENST00000606952 1275 ntTSL 1 (best)18.23■□□□□ 0.513e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.513e-7■■■■■ 42.1
XRN2Q9H0D6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.51e-10■■■■■ 42.1
XRN2Q9H0D6 PMF1-205ENST00000497069 837 ntTSL 318.06■□□□□ 0.483e-7■■■■■ 42.1
XRN2Q9H0D6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.64■□□□□ 0.411e-10■■■■■ 42.1
XRN2Q9H0D6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.233e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.61■□□□□ 0.093e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.18■□□□□ 0.023e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC14.25□□□□□ -0.133e-7■■■■■ 42.1
XRN2Q9H0D6 PMF1-204ENST00000466489 933 ntTSL 1 (best)11.32□□□□□ -0.63e-7■■■■■ 42.1
XRN2Q9H0D6 OAZ1-209ENST00000592787 857 ntTSL 219.1■□□□□ 0.656e-11■■■■■ 42
XRN2Q9H0D6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.472e-6■■■■■ 41.9
XRN2Q9H0D6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.192e-6■■■■■ 41.9
XRN2Q9H0D6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.082e-6■■■■■ 41.9
XRN2Q9H0D6 DEAF1-206ENST00000526857 567 ntTSL 315.7■□□□□ 0.13e-10■■■■■ 41.8
XRN2Q9H0D6 CAMSAP3-204ENST00000595692 1667 ntTSL 230.42■■■□□ 2.463e-26■■■■■ 41.5
XRN2Q9H0D6 AATK-202ENST00000374792 4938 ntTSL 219.84■□□□□ 0.773e-7■■■■■ 41.5
XRN2Q9H0D6 IL4R-214ENST00000565696 533 ntTSL 318.22■□□□□ 0.511e-13■■■■■ 41.5
XRN2Q9H0D6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.373e-7■■■■■ 41.5
XRN2Q9H0D6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.164e-6■■■■■ 41.5
XRN2Q9H0D6 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.121e-13■■■■■ 41.5
XRN2Q9H0D6 AATK-206ENST00000572798 407 ntTSL 215.12■□□□□ 0.013e-7■■■■■ 41.5
XRN2Q9H0D6 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.811e-13■■■■■ 41.5
XRN2Q9H0D6 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC12.25□□□□□ -0.452e-6■■■■■ 41.4
XRN2Q9H0D6 AGO2-209ENST00000523609 3050 ntTSL 1 (best)11.5□□□□□ -0.572e-6■■■■■ 41.4
XRN2Q9H0D6 AGO2-202ENST00000517293 422 ntTSL 38.75□□□□□ -1.012e-6■■■■■ 41.4
XRN2Q9H0D6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.542e-6■■■■■ 41.4
XRN2Q9H0D6 PCK1-206ENST00000498194 783 ntTSL 213.55□□□□□ -0.241e-8■■■■■ 41.3
XRN2Q9H0D6 PRKAR1B-207ENST00000430040 1006 ntTSL 319.85■□□□□ 0.774e-6■■■■■ 41.3
XRN2Q9H0D6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.577e-7■■■■■ 41.3
XRN2Q9H0D6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.69■■□□□ 1.227e-7■■■■■ 41.3
XRN2Q9H0D6 UFD1-206ENST00000466373 3059 ntTSL 210.36□□□□□ -0.757e-7■■■■■ 41.3
XRN2Q9H0D6 UFD1-205ENST00000459854 5038 ntTSL 1 (best)9.89□□□□□ -0.837e-7■■■■■ 41.3
XRN2Q9H0D6 CSNK1D-205ENST00000403276 1040 ntTSL 219.96■□□□□ 0.792e-11■■■■■ 41.3
XRN2Q9H0D6 CSNK1D-213ENST00000580446 612 ntTSL 318.28■□□□□ 0.522e-11■■■■■ 41.3
XRN2Q9H0D6 CSNK1D-219ENST00000581660 611 ntTSL 517.61■□□□□ 0.412e-11■■■■■ 41.3
XRN2Q9H0D6 AL356356.1-201ENST00000442435 665 ntTSL 5 BASIC12.92□□□□□ -0.347e-7■■■■■ 41.2
XRN2Q9H0D6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.34■■□□□ 1.656e-56■■■■■ 41.2
XRN2Q9H0D6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.626e-56■■■■■ 41.2
XRN2Q9H0D6 FUT11-203ENST00000465695 2408 ntTSL 217■□□□□ 0.316e-56■■■■■ 41.2
XRN2Q9H0D6 RBBP6-211ENST00000568316 556 ntTSL 528.37■■■□□ 2.134e-24■■■■■ 41.2
XRN2Q9H0D6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.782e-6■■■■■ 41.2
XRN2Q9H0D6 RBBP6-210ENST00000568015 695 ntTSL 318.9■□□□□ 0.622e-7■■■■■ 41.2
XRN2Q9H0D6 RBBP6-207ENST00000564314 3361 ntTSL 28□□□□□ -1.132e-7■■■■■ 41.2
XRN2Q9H0D6 RBBP6-209ENST00000567686 1138 ntTSL 55.54□□□□□ -1.522e-7■■■■■ 41.2
XRN2Q9H0D6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.119e-7■■■■■ 41.2
XRN2Q9H0D6 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.126e-22■■■■■ 41
XRN2Q9H0D6 ATXN2L-207ENST00000561732 643 ntTSL 222.3■■□□□ 1.164e-10■■■■■ 41
XRN2Q9H0D6 GNAS-229ENST00000470512 913 ntTSL 530.08■■■□□ 2.412e-7■■■■■ 41
XRN2Q9H0D6 GNAS-237ENST00000480232 893 ntTSL 529.68■■■□□ 2.342e-7■■■■■ 41
XRN2Q9H0D6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.19■■□□□ 1.942e-7■■■■■ 41
XRN2Q9H0D6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.19■■□□□ 1.942e-7■■■■■ 41
XRN2Q9H0D6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.922e-7■■■■■ 41
XRN2Q9H0D6 GNAS-234ENST00000477931 1663 ntTSL 1 (best)26.93■■□□□ 1.92e-7■■■■■ 41
XRN2Q9H0D6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.512e-7■■■■■ 41
XRN2Q9H0D6 GNAS-238ENST00000480975 1534 ntTSL 522.28■■□□□ 1.162e-7■■■■■ 41
XRN2Q9H0D6 GNAS-247ENST00000488546 897 ntTSL 514.25□□□□□ -0.132e-7■■■■■ 41
XRN2Q9H0D6 GNAS-239ENST00000481039 756 ntTSL 514.18□□□□□ -0.142e-7■■■■■ 41
XRN2Q9H0D6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.56□□□□□ -0.242e-7■■■■■ 41
XRN2Q9H0D6 GNAS-222ENST00000464624 3764 ntTSL 513.48□□□□□ -0.252e-7■■■■■ 41
XRN2Q9H0D6 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.93□□□□□ -0.52e-7■■■■■ 41
XRN2Q9H0D6 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC10.42□□□□□ -0.742e-7■■■■■ 41
XRN2Q9H0D6 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC10.08□□□□□ -0.82e-7■■■■■ 41
XRN2Q9H0D6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.432e-7■■■■■ 40.9
XRN2Q9H0D6 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.95□□□□□ -1.142e-7■■■■■ 40.9
XRN2Q9H0D6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.351e-8■■■■■ 40.8
XRN2Q9H0D6 ZNF580-206ENST00000592881 1019 ntTSL 325.51■■□□□ 1.672e-7■■■■■ 40.8
XRN2Q9H0D6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.9■■□□□ 1.99e-11■■■■■ 40.8
XRN2Q9H0D6 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.48■□□□□ 0.239e-11■■■■■ 40.8
XRN2Q9H0D6 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.68□□□□□ -1.186e-11■■■■■ 40.8
XRN2Q9H0D6 CUX1-210ENST00000497815 947 ntTSL 213.52□□□□□ -0.254e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC11.72□□□□□ -0.534e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC11.54□□□□□ -0.564e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC11.28□□□□□ -0.64e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC11.08□□□□□ -0.644e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.71□□□□□ -0.694e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.81□□□□□ -0.844e-7■■■■■ 40.8
XRN2Q9H0D6 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.844e-7■■■■■ 40.8
XRN2Q9H0D6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.314e-10■■■■■ 40.7
XRN2Q9H0D6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.574e-10■■■■■ 40.7
XRN2Q9H0D6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.614e-10■■■■■ 40.7
XRN2Q9H0D6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.724e-6■■■■■ 40.7
XRN2Q9H0D6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.974e-6■■■■■ 40.7
XRN2Q9H0D6 RAPGEF1-206ENST00000438647 588 ntTSL 329.14■■■□□ 2.266e-8■■■■■ 40.6
Retrieved 100 of 21,068 protein–RNA pairs in 279.4 ms