RNA–Protein interactions for RNA: ENST00000640028.1

CACNA1H-212, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,375 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-212ENST00000640028 DCAF8L2P0C7V8 631 aa33.77■■■■□ 3
CACNA1H-212ENST00000640028 EHMT2Q96KQ7 1210 aa32.47■■■□□ 2.79
CACNA1H-212ENST00000640028 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
CACNA1H-212ENST00000640028 PELP1Q8IZL8 1130 aaKnown RBP31.98■■■□□ 2.71
CACNA1H-212ENST00000640028 ERICH6Q7L0X2 663 aa31.4■■■□□ 2.62
CACNA1H-212ENST00000640028 TTBK1Q5TCY1 1321 aaPredicted RBP31.38■■■□□ 2.61
CACNA1H-212ENST00000640028 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
CACNA1H-212ENST00000640028 MYT1Q01538 1121 aa31.01■■■□□ 2.55
CACNA1H-212ENST00000640028 PCGF6Q9BYE7 350 aa30.89■■■□□ 2.54
CACNA1H-212ENST00000640028 APLP2Q06481 763 aa30.75■■■□□ 2.51
CACNA1H-212ENST00000640028 FAM9AQ8IZU1 332 aaPredicted RBP30.69■■■□□ 2.5
CACNA1H-212ENST00000640028 YTHDC1Q96MU7 727 aaKnown RBP30.66■■■□□ 2.5
CACNA1H-212ENST00000640028 CCER1Q8TC90 406 aaPredicted RBP30.58■■■□□ 2.49
CACNA1H-212ENST00000640028 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
CACNA1H-212ENST00000640028 CENPBP07199 599 aaPredicted RBP30.54■■■□□ 2.48
CACNA1H-212ENST00000640028 ATP1B4Q9UN42 357 aaPredicted RBP30.2■■■□□ 2.42
CACNA1H-212ENST00000640028 NEFLP07196 543 aa30.05■■■□□ 2.4
CACNA1H-212ENST00000640028 PPARGC1BQ86YN6 1023 aaKnown RBP29.85■■■□□ 2.37
CACNA1H-212ENST00000640028 DAXXQ9UER7 740 aaPredicted RBP29.69■■■□□ 2.34
CACNA1H-212ENST00000640028 CNGB1Q14028 1251 aaPredicted RBP29.69■■■□□ 2.34
CACNA1H-212ENST00000640028 ZEB1P37275 1124 aaPredicted RBP29.61■■■□□ 2.33
CACNA1H-212ENST00000640028 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
CACNA1H-212ENST00000640028 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
CACNA1H-212ENST00000640028 CHIC1Q5VXU3 224 aa29.24■■■□□ 2.27
CACNA1H-212ENST00000640028 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
CACNA1H-212ENST00000640028 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
CACNA1H-212ENST00000640028 ITGAEP38570 1179 aa29.09■■■□□ 2.25
CACNA1H-212ENST00000640028 SLC4A1APQ9BWU0 796 aaKnown RBP29.02■■■□□ 2.24
CACNA1H-212ENST00000640028 HRCP23327 699 aa28.96■■■□□ 2.23
CACNA1H-212ENST00000640028 ZNF316A6NFI3 1004 aaPredicted RBP28.96■■■□□ 2.23
CACNA1H-212ENST00000640028 RTL5Q5HYW3 569 aaPredicted RBP28.95■■■□□ 2.23
CACNA1H-212ENST00000640028 CLSPNQ9HAW4 1339 aa28.93■■■□□ 2.22
CACNA1H-212ENST00000640028 BCANQ96GW7 911 aa28.82■■■□□ 2.2
CACNA1H-212ENST00000640028 BCL11AQ9H165 835 aa28.78■■■□□ 2.2
CACNA1H-212ENST00000640028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.66■■■□□ 2.18
CACNA1H-212ENST00000640028 HNRNPUL2Q1KMD3 747 aaKnown RBP28.66■■■□□ 2.18
CACNA1H-212ENST00000640028 TRIM26Q12899 539 aaPredicted RBP28.64■■■□□ 2.17
CACNA1H-212ENST00000640028 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
CACNA1H-212ENST00000640028 LOC105371045A0A1W2PR82 267 aa28.45■■■□□ 2.15
CACNA1H-212ENST00000640028 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
CACNA1H-212ENST00000640028 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
CACNA1H-212ENST00000640028 EIF5BO60841 1220 aaKnown RBP28.36■■■□□ 2.13
CACNA1H-212ENST00000640028 SLC24A1O60721 1099 aa28.31■■■□□ 2.12
CACNA1H-212ENST00000640028 CDK11AQ9UQ88 783 aaPredicted RBP28.06■■■□□ 2.08
CACNA1H-212ENST00000640028 NEUROD1Q13562 356 aa28.04■■■□□ 2.08
CACNA1H-212ENST00000640028 NPM2Q86SE8 214 aaKnown RBP28.04■■■□□ 2.08
CACNA1H-212ENST00000640028 ZBTB47Q9UFB7 747 aaPredicted RBP27.98■■■□□ 2.07
CACNA1H-212ENST00000640028 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
CACNA1H-212ENST00000640028 ARXQ96QS3 562 aa27.82■■■□□ 2.04
CACNA1H-212ENST00000640028 FAM50AQ14320 339 aaKnown RBP27.81■■■□□ 2.04
CACNA1H-212ENST00000640028 CANXP27824 592 aaKnown RBP27.79■■■□□ 2.04
CACNA1H-212ENST00000640028 TRIM52Q96A61 297 aa27.75■■■□□ 2.03
CACNA1H-212ENST00000640028 NBR1Q14596 966 aa27.7■■■□□ 2.02
CACNA1H-212ENST00000640028 ANP32CO43423 234 aa27.64■■■□□ 2.01
CACNA1H-212ENST00000640028 ANP32AP39687 249 aaKnown RBP27.63■■■□□ 2.01
CACNA1H-212ENST00000640028 HSP90AA1P07900 732 aaKnown RBP27.43■■□□□ 1.98
CACNA1H-212ENST00000640028 ACIN1Q9UKV3 1341 aaKnown RBP27.42■■□□□ 1.98
CACNA1H-212ENST00000640028 FKBP8Q14318 412 aa27.41■■□□□ 1.98
CACNA1H-212ENST00000640028 ANP32BQ92688 251 aaKnown RBP27.39■■□□□ 1.98
CACNA1H-212ENST00000640028 GLIPR1L2Q4G1C9 344 aa27.35■■□□□ 1.97
CACNA1H-212ENST00000640028 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.96
CACNA1H-212ENST00000640028 PLPPR3Q6T4P5 718 aa27.24■■□□□ 1.95
CACNA1H-212ENST00000640028 NEFMP07197 916 aa27.23■■□□□ 1.95
CACNA1H-212ENST00000640028 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
CACNA1H-212ENST00000640028 IRX6P78412 446 aaPredicted RBP27.1■■□□□ 1.93
CACNA1H-212ENST00000640028 FAM9BQ8IZU0 186 aa27.03■■□□□ 1.92
CACNA1H-212ENST00000640028 FBLN2P98095 1184 aa27.01■■□□□ 1.91
CACNA1H-212ENST00000640028 RTN4Q9NQC3 1192 aaKnown RBP27.01■■□□□ 1.91
CACNA1H-212ENST00000640028 TULP1O00294 542 aaPredicted RBP26.97■■□□□ 1.91
CACNA1H-212ENST00000640028 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
CACNA1H-212ENST00000640028 TPRNQ4KMQ1 711 aa26.94■■□□□ 1.9
CACNA1H-212ENST00000640028 AMER1Q5JTC6 1135 aaPredicted RBP26.91■■□□□ 1.9
CACNA1H-212ENST00000640028 UPF2Q9HAU5 1272 aaKnown RBP26.91■■□□□ 1.9
CACNA1H-212ENST00000640028 PLEKHG5O94827 1062 aa26.89■■□□□ 1.89
CACNA1H-212ENST00000640028 A0A0G2JS52 829 aa26.88■■□□□ 1.89
CACNA1H-212ENST00000640028 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
CACNA1H-212ENST00000640028 CDK11BP21127 795 aaKnown RBP26.85■■□□□ 1.89
CACNA1H-212ENST00000640028 P3H3Q8IVL6 736 aa26.83■■□□□ 1.88
CACNA1H-212ENST00000640028 CCDC136Q96JN2 1154 aa26.81■■□□□ 1.88
CACNA1H-212ENST00000640028 DDX10Q13206 875 aaKnown RBP26.81■■□□□ 1.88
CACNA1H-212ENST00000640028 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
CACNA1H-212ENST00000640028 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
CACNA1H-212ENST00000640028 CHGAP10645 457 aaKnown RBP26.76■■□□□ 1.87
CACNA1H-212ENST00000640028 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
CACNA1H-212ENST00000640028 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
CACNA1H-212ENST00000640028 TAOK2Q9UL54 1235 aa26.66■■□□□ 1.86
CACNA1H-212ENST00000640028 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.86
CACNA1H-212ENST00000640028 NCBP3Q53F19 620 aaKnown RBP26.63■■□□□ 1.85
CACNA1H-212ENST00000640028 TRIM44Q96DX7 344 aaPredicted RBP26.62■■□□□ 1.85
CACNA1H-212ENST00000640028 NCLP19338 710 aaKnown RBP26.59■■□□□ 1.85
CACNA1H-212ENST00000640028 STAG3Q9UJ98 1225 aa26.57■■□□□ 1.84
CACNA1H-212ENST00000640028 NAP1L5Q96NT1 182 aaPredicted RBP26.54■■□□□ 1.84
CACNA1H-212ENST00000640028 ZBTB7CA1YPR0 619 aa26.54■■□□□ 1.84
CACNA1H-212ENST00000640028 DNTTIP2Q5QJE6 756 aaKnown RBP26.53■■□□□ 1.84
CACNA1H-212ENST00000640028 ARID4BQ4LE39 1312 aaPredicted RBP26.5■■□□□ 1.83
CACNA1H-212ENST00000640028 TMC1Q8TDI8 760 aa26.48■■□□□ 1.83
CACNA1H-212ENST00000640028 TNNT2P45379 298 aaPredicted RBP26.46■■□□□ 1.83
CACNA1H-212ENST00000640028 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.44■■□□□ 1.82
CACNA1H-212ENST00000640028 LAS1LQ9Y4W2 734 aaKnown RBP26.44■■□□□ 1.82
CACNA1H-212ENST00000640028 PTMAP06454 111 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms