RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 NISCHQ9Y2I1 1504 aa42.37■■■■■ 4.37
RAB4A-202ENST00000473894 CCDC180Q9P1Z9 1646 aa37.49■■■■□ 3.59
RAB4A-202ENST00000473894 ABCC9O60706 1549 aa36.05■■■■□ 3.36
RAB4A-202ENST00000473894 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
RAB4A-202ENST00000473894 DCAF1Q9Y4B6 1507 aa35.17■■■■□ 3.22
RAB4A-202ENST00000473894 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
RAB4A-202ENST00000473894 NACADO15069 1562 aa35.13■■■■□ 3.21
RAB4A-202ENST00000473894 RB1CC1Q8TDY2 1594 aa35■■■■□ 3.19
RAB4A-202ENST00000473894 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
RAB4A-202ENST00000473894 UNC13AQ9UPW8 1703 aa34.22■■■■□ 3.07
RAB4A-202ENST00000473894 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
RAB4A-202ENST00000473894 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
RAB4A-202ENST00000473894 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
RAB4A-202ENST00000473894 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
RAB4A-202ENST00000473894 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
RAB4A-202ENST00000473894 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
RAB4A-202ENST00000473894 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
RAB4A-202ENST00000473894 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
RAB4A-202ENST00000473894 SMARCA4P51532 1647 aa32.76■■■□□ 2.83
RAB4A-202ENST00000473894 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
RAB4A-202ENST00000473894 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
RAB4A-202ENST00000473894 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
RAB4A-202ENST00000473894 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
RAB4A-202ENST00000473894 SMARCA2P51531 1590 aa32.45■■■□□ 2.79
RAB4A-202ENST00000473894 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.79
RAB4A-202ENST00000473894 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
RAB4A-202ENST00000473894 HMGXB3Q12766 1538 aa32.3■■■□□ 2.76
RAB4A-202ENST00000473894 WIZO95785 1651 aa32.27■■■□□ 2.76
RAB4A-202ENST00000473894 BAZ1BQ9UIG0 1483 aaKnown RBP32.18■■■□□ 2.74
RAB4A-202ENST00000473894 TOP2AP11388 1531 aaKnown RBP32.01■■■□□ 2.72
RAB4A-202ENST00000473894 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.68
RAB4A-202ENST00000473894 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
RAB4A-202ENST00000473894 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
RAB4A-202ENST00000473894 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
RAB4A-202ENST00000473894 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
RAB4A-202ENST00000473894 CFTRP13569 1480 aa31.4■■■□□ 2.62
RAB4A-202ENST00000473894 NESP48681 1621 aa31.36■■■□□ 2.61
RAB4A-202ENST00000473894 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
RAB4A-202ENST00000473894 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
RAB4A-202ENST00000473894 CUX2O14529 1486 aa31.16■■■□□ 2.58
RAB4A-202ENST00000473894 ERCC6Q03468 1493 aa31.08■■■□□ 2.57
RAB4A-202ENST00000473894 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
RAB4A-202ENST00000473894 KIF21AQ7Z4S6 1674 aa31.04■■■□□ 2.56
RAB4A-202ENST00000473894 CEP164Q9UPV0 1460 aa30.96■■■□□ 2.55
RAB4A-202ENST00000473894 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
RAB4A-202ENST00000473894 MRC2Q9UBG0 1479 aa30.83■■■□□ 2.53
RAB4A-202ENST00000473894 WDR62O43379 1518 aa30.76■■■□□ 2.51
RAB4A-202ENST00000473894 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
RAB4A-202ENST00000473894 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
RAB4A-202ENST00000473894 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
RAB4A-202ENST00000473894 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
RAB4A-202ENST00000473894 CUX1P39880 1505 aa30.59■■■□□ 2.49
RAB4A-202ENST00000473894 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
RAB4A-202ENST00000473894 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
RAB4A-202ENST00000473894 BIVM-ERCC5R4GMW8 1640 aa30.48■■■□□ 2.47
RAB4A-202ENST00000473894 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
RAB4A-202ENST00000473894 POLA1P09884 1462 aaPredicted RBP30.4■■■□□ 2.46
RAB4A-202ENST00000473894 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
RAB4A-202ENST00000473894 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
RAB4A-202ENST00000473894 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
RAB4A-202ENST00000473894 SOGA1O94964 1423 aa30.26■■■□□ 2.43
RAB4A-202ENST00000473894 RAD54L2Q9Y4B4 1467 aa30.21■■■□□ 2.43
RAB4A-202ENST00000473894 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
RAB4A-202ENST00000473894 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
RAB4A-202ENST00000473894 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
RAB4A-202ENST00000473894 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
RAB4A-202ENST00000473894 ZNF608Q9ULD9 1512 aaPredicted RBP30.1■■■□□ 2.41
RAB4A-202ENST00000473894 EIF4G3O43432 1585 aaKnown RBP30.03■■■□□ 2.4
RAB4A-202ENST00000473894 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
RAB4A-202ENST00000473894 TDRD9Q8NDG6 1382 aaKnown RBP29.99■■■□□ 2.39
RAB4A-202ENST00000473894 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.395e-10■■■■■ 39.2
RAB4A-202ENST00000473894 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
RAB4A-202ENST00000473894 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
RAB4A-202ENST00000473894 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
RAB4A-202ENST00000473894 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
RAB4A-202ENST00000473894 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
RAB4A-202ENST00000473894 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
RAB4A-202ENST00000473894 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
RAB4A-202ENST00000473894 IGF1RP08069 1367 aa29.73■■■□□ 2.35
RAB4A-202ENST00000473894 SNAPC4Q5SXM2 1469 aa29.73■■■□□ 2.35
RAB4A-202ENST00000473894 RUSC2Q8N2Y8 1516 aa29.72■■■□□ 2.35
RAB4A-202ENST00000473894 EEA1Q15075 1411 aa29.7■■■□□ 2.34
RAB4A-202ENST00000473894 ADAMTS12P58397 1594 aa29.65■■■□□ 2.34
RAB4A-202ENST00000473894 SYNJ2O15056 1496 aa29.63■■■□□ 2.33
RAB4A-202ENST00000473894 CUL7Q14999 1698 aa29.63■■■□□ 2.33
RAB4A-202ENST00000473894 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
RAB4A-202ENST00000473894 CHD1O14646 1710 aa29.54■■■□□ 2.32
RAB4A-202ENST00000473894 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
RAB4A-202ENST00000473894 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
RAB4A-202ENST00000473894 GRIN2AQ12879 1464 aa29.49■■■□□ 2.31
RAB4A-202ENST00000473894 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
RAB4A-202ENST00000473894 PRXQ9BXM0 1461 aa29.48■■■□□ 2.31
RAB4A-202ENST00000473894 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
RAB4A-202ENST00000473894 FBLN2P98095 1184 aa29.41■■■□□ 2.3
RAB4A-202ENST00000473894 NUP160Q12769 1436 aa29.38■■■□□ 2.29
RAB4A-202ENST00000473894 FAM9AQ8IZU1 332 aaPredicted RBP29.36■■■□□ 2.29
RAB4A-202ENST00000473894 KIF21BO75037 1637 aa29.34■■■□□ 2.29
RAB4A-202ENST00000473894 CEP170Q5SW79 1584 aa29.31■■■□□ 2.28
RAB4A-202ENST00000473894 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
RAB4A-202ENST00000473894 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms