RNA–Protein interactions for RNA: ENST00000534210.6

DNHD1-220, Transcript of dynein heavy chain domain 1, humanhuman

TSL 1 (best)

Gene DNHD1, Length 2,867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNHD1-220ENST00000534210 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
DNHD1-220ENST00000534210 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
DNHD1-220ENST00000534210 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
DNHD1-220ENST00000534210 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
DNHD1-220ENST00000534210 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
DNHD1-220ENST00000534210 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
DNHD1-220ENST00000534210 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
DNHD1-220ENST00000534210 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
DNHD1-220ENST00000534210 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
DNHD1-220ENST00000534210 ABCC9O60706 1549 aa24.27■■□□□ 1.48
DNHD1-220ENST00000534210 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
DNHD1-220ENST00000534210 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
DNHD1-220ENST00000534210 HRCP23327 699 aa23.93■■□□□ 1.42
DNHD1-220ENST00000534210 LOC105371045A0A1W2PR82 267 aa23.92■■□□□ 1.42
DNHD1-220ENST00000534210 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
DNHD1-220ENST00000534210 NACADO15069 1562 aa23.88■■□□□ 1.41
DNHD1-220ENST00000534210 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
DNHD1-220ENST00000534210 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
DNHD1-220ENST00000534210 TRIM41Q8WV44 630 aa23.64■■□□□ 1.38
DNHD1-220ENST00000534210 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
DNHD1-220ENST00000534210 WIZO95785 1651 aa23.5■■□□□ 1.35
DNHD1-220ENST00000534210 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
DNHD1-220ENST00000534210 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
DNHD1-220ENST00000534210 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
DNHD1-220ENST00000534210 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
DNHD1-220ENST00000534210 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
DNHD1-220ENST00000534210 UNC13AQ9UPW8 1703 aa23.2■■□□□ 1.3
DNHD1-220ENST00000534210 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
DNHD1-220ENST00000534210 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
DNHD1-220ENST00000534210 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
DNHD1-220ENST00000534210 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
DNHD1-220ENST00000534210 SMARCA2P51531 1590 aa23■■□□□ 1.27
DNHD1-220ENST00000534210 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
DNHD1-220ENST00000534210 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
DNHD1-220ENST00000534210 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
DNHD1-220ENST00000534210 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
DNHD1-220ENST00000534210 SOGA1O94964 1423 aa22.73■■□□□ 1.23
DNHD1-220ENST00000534210 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
DNHD1-220ENST00000534210 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
DNHD1-220ENST00000534210 EEA1Q15075 1411 aa22.64■■□□□ 1.22
DNHD1-220ENST00000534210 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
DNHD1-220ENST00000534210 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
DNHD1-220ENST00000534210 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
DNHD1-220ENST00000534210 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
DNHD1-220ENST00000534210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
DNHD1-220ENST00000534210 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
DNHD1-220ENST00000534210 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
DNHD1-220ENST00000534210 TTBK1Q5TCY1 1321 aaPredicted RBP22.5■■□□□ 1.19
DNHD1-220ENST00000534210 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
DNHD1-220ENST00000534210 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
DNHD1-220ENST00000534210 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
DNHD1-220ENST00000534210 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
DNHD1-220ENST00000534210 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
DNHD1-220ENST00000534210 KIF21BO75037 1637 aa22.36■■□□□ 1.17
DNHD1-220ENST00000534210 CLIP1P30622 1438 aa22.23■■□□□ 1.15
DNHD1-220ENST00000534210 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
DNHD1-220ENST00000534210 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
DNHD1-220ENST00000534210 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.13
DNHD1-220ENST00000534210 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
DNHD1-220ENST00000534210 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
DNHD1-220ENST00000534210 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
DNHD1-220ENST00000534210 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
DNHD1-220ENST00000534210 APLP2Q06481 763 aa22.04■■□□□ 1.12
DNHD1-220ENST00000534210 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
DNHD1-220ENST00000534210 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
DNHD1-220ENST00000534210 HNRNPUL2Q1KMD3 747 aaKnown RBP22.02■■□□□ 1.12
DNHD1-220ENST00000534210 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
DNHD1-220ENST00000534210 CUX1P39880 1505 aa21.97■■□□□ 1.11
DNHD1-220ENST00000534210 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
DNHD1-220ENST00000534210 CFTRP13569 1480 aa21.9■■□□□ 1.1
DNHD1-220ENST00000534210 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
DNHD1-220ENST00000534210 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
DNHD1-220ENST00000534210 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
DNHD1-220ENST00000534210 ACIN1Q9UKV3 1341 aaKnown RBP21.85■■□□□ 1.09
DNHD1-220ENST00000534210 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
DNHD1-220ENST00000534210 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
DNHD1-220ENST00000534210 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
DNHD1-220ENST00000534210 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
DNHD1-220ENST00000534210 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
DNHD1-220ENST00000534210 CUX2O14529 1486 aa21.67■■□□□ 1.06
DNHD1-220ENST00000534210 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
DNHD1-220ENST00000534210 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
DNHD1-220ENST00000534210 IGF1RP08069 1367 aa21.61■■□□□ 1.05
DNHD1-220ENST00000534210 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
DNHD1-220ENST00000534210 DHX57Q6P158 1386 aaKnown RBP21.6■■□□□ 1.05
DNHD1-220ENST00000534210 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
DNHD1-220ENST00000534210 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
DNHD1-220ENST00000534210 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.05
DNHD1-220ENST00000534210 MIER1Q8N108 512 aa21.55■■□□□ 1.04
DNHD1-220ENST00000534210 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
DNHD1-220ENST00000534210 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
DNHD1-220ENST00000534210 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
DNHD1-220ENST00000534210 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
DNHD1-220ENST00000534210 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
DNHD1-220ENST00000534210 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
DNHD1-220ENST00000534210 ITGAEP38570 1179 aa21.44■■□□□ 1.02
DNHD1-220ENST00000534210 MAP3K1Q13233 1512 aa21.43■■□□□ 1.02
DNHD1-220ENST00000534210 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
DNHD1-220ENST00000534210 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
DNHD1-220ENST00000534210 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms