RNA–Protein interactions for RNA: ENST00000480975.5

GNAS-238, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 1,534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-238	ENST00000480975	NISCH	Q9Y2I1	1504 aa		46.44	■■■■■ 5.03
GNAS-238	ENST00000480975	CCDC180	Q9P1Z9	1646 aa		40.97	■■■■■ 4.15
GNAS-238	ENST00000480975	ABCC9	O60706	1549 aa		39.57	■■■■□ 3.93
GNAS-238	ENST00000480975	DCAF8L2	P0C7V8	631 aa		38.81	■■■■□ 3.8
GNAS-238	ENST00000480975	ZCCHC6	Q5VYS8	1495 aa	Known RBP	38.78	■■■■□ 3.8
GNAS-238	ENST00000480975	DCAF1	Q9Y4B6	1507 aa		38.43	■■■■□ 3.74
GNAS-238	ENST00000480975	NACAD	O15069	1562 aa		38.42	■■■■□ 3.74
GNAS-238	ENST00000480975	MYO15B	Q96JP2	1530 aa		38.36	■■■■□ 3.73
GNAS-238	ENST00000480975	RB1CC1	Q8TDY2	1594 aa		38.33	■■■■□ 3.73
GNAS-238	ENST00000480975	SCRIB	Q14160	1630 aa		37.47	■■■■□ 3.59
GNAS-238	ENST00000480975	UNC13A	Q9UPW8	1703 aa		37.34	■■■■□ 3.57
GNAS-238	ENST00000480975	SHROOM4	Q9ULL8	1493 aa		37.18	■■■■□ 3.54
GNAS-238	ENST00000480975	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.15	■■■■□ 3.54	1e-59	■■□□□ 11.4
GNAS-238	ENST00000480975	BICRA	Q9NZM4	1560 aa		37.04	■■■■□ 3.52
GNAS-238	ENST00000480975	CECR2	Q9BXF3	1484 aa		36.1	■■■■□ 3.37
GNAS-238	ENST00000480975	EIF4G1	Q04637	1599 aa	Known RBP	36.07	■■■■□ 3.37
GNAS-238	ENST00000480975	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	35.98	■■■■□ 3.35
GNAS-238	ENST00000480975	SMARCA4	P51532	1647 aa		35.88	■■■■□ 3.33
GNAS-238	ENST00000480975	MROH2B	Q7Z745	1585 aa		35.79	■■■■□ 3.32
GNAS-238	ENST00000480975	CC2D2A	Q9P2K1	1620 aa		35.77	■■■■□ 3.32
GNAS-238	ENST00000480975	DNAJC5B	Q9UF47	199 aa		35.72	■■■■□ 3.31
GNAS-238	ENST00000480975	RSF1	Q96T23	1441 aa	Predicted RBP	35.64	■■■■□ 3.3
GNAS-238	ENST00000480975	SMARCA2	P51531	1590 aa		35.57	■■■■□ 3.29
GNAS-238	ENST00000480975	ATAD2B	Q9ULI0	1458 aa		35.56	■■■■□ 3.28
GNAS-238	ENST00000480975	PEG3	Q9GZU2	1588 aa		35.49	■■■■□ 3.27
GNAS-238	ENST00000480975	NCAPD3	P42695	1498 aa		35.45	■■■■□ 3.27
GNAS-238	ENST00000480975	WIZ	O95785	1651 aa		35.44	■■■■□ 3.26
GNAS-238	ENST00000480975	SUPT5H	O00267	1087 aa	Known RBP	35.4	■■■■□ 3.26
GNAS-238	ENST00000480975	BAZ1B	Q9UIG0	1483 aa	Known RBP	35.35	■■■■□ 3.25
GNAS-238	ENST00000480975	HMGXB3	Q12766	1538 aa		35.3	■■■■□ 3.24
GNAS-238	ENST00000480975	TOP2A	P11388	1531 aa	Known RBP	35.1	■■■■□ 3.21
GNAS-238	ENST00000480975	CCDC88B	A6NC98	1476 aa		34.73	■■■■□ 3.15
GNAS-238	ENST00000480975	CADPS	Q9ULU8	1353 aa		34.5	■■■■□ 3.11
GNAS-238	ENST00000480975	LAMC3	Q9Y6N6	1575 aa		34.42	■■■■□ 3.1
GNAS-238	ENST00000480975	NES	P48681	1621 aa		34.38	■■■■□ 3.09
GNAS-238	ENST00000480975	CFTR	P13569	1480 aa		34.37	■■■■□ 3.09
GNAS-238	ENST00000480975	PDS5B	Q9NTI5	1447 aa		34.25	■■■■□ 3.07
GNAS-238	ENST00000480975	ERCC6	Q03468	1493 aa		34.12	■■■■□ 3.05
GNAS-238	ENST00000480975	PRDM2	Q13029	1718 aa		34.11	■■■■□ 3.05
GNAS-238	ENST00000480975	FANCD2	Q9BXW9	1451 aa		34.08	■■■■□ 3.05
GNAS-238	ENST00000480975	CEP164	Q9UPV0	1460 aa		33.99	■■■■□ 3.03
GNAS-238	ENST00000480975	KIF21A	Q7Z4S6	1674 aa		33.97	■■■■□ 3.03
GNAS-238	ENST00000480975	MRC2	Q9UBG0	1479 aa		33.79	■■■■□ 3
GNAS-238	ENST00000480975	ABCC8	Q09428	1581 aa		33.69	■■■□□ 2.98
GNAS-238	ENST00000480975	THOC2	Q8NI27	1593 aa	Known RBP	33.66	■■■□□ 2.98
GNAS-238	ENST00000480975	URB2	Q14146	1524 aa	Known RBP	33.64	■■■□□ 2.98
GNAS-238	ENST00000480975	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.64	■■■□□ 2.98	4e-6	■■□□□ 11.4
GNAS-238	ENST00000480975	WDR62	O43379	1518 aa		33.59	■■■□□ 2.97
GNAS-238	ENST00000480975	DNMBP	Q6XZF7	1577 aa		33.59	■■■□□ 2.97
GNAS-238	ENST00000480975	TOPBP1	Q92547	1522 aa		33.58	■■■□□ 2.97
GNAS-238	ENST00000480975	CUX1	P39880	1505 aa		33.53	■■■□□ 2.96
GNAS-238	ENST00000480975	CUX2	O14529	1486 aa		33.45	■■■□□ 2.95
GNAS-238	ENST00000480975	TOP2B	Q02880	1626 aa		33.43	■■■□□ 2.94
GNAS-238	ENST00000480975	TRIM41	Q8WV44	630 aa		33.43	■■■□□ 2.94
GNAS-238	ENST00000480975	SYNJ1	O43426	1573 aa		33.42	■■■□□ 2.94
GNAS-238	ENST00000480975	BIVM-ERCC5	R4GMW8	1640 aa		33.39	■■■□□ 2.94
GNAS-238	ENST00000480975	FGD5	Q6ZNL6	1462 aa		33.36	■■■□□ 2.93
GNAS-238	ENST00000480975	CHIC1	Q5VXU3	224 aa		33.34	■■■□□ 2.93
GNAS-238	ENST00000480975	POLA1	P09884	1462 aa	Predicted RBP	33.33	■■■□□ 2.93
GNAS-238	ENST00000480975	SOGA1	O94964	1423 aa		33.3	■■■□□ 2.92
GNAS-238	ENST00000480975	IFT140	Q96RY7	1462 aa		33.24	■■■□□ 2.91
GNAS-238	ENST00000480975	RAD54L2	Q9Y4B4	1467 aa		33.2	■■■□□ 2.91
GNAS-238	ENST00000480975	TARBP1	Q13395	1621 aa	Known RBP	33.11	■■■□□ 2.89
GNAS-238	ENST00000480975	ABCA10	Q8WWZ4	1543 aa		33.06	■■■□□ 2.88
GNAS-238	ENST00000480975	TDRD9	Q8NDG6	1382 aa	Known RBP	33.02	■■■□□ 2.88
GNAS-238	ENST00000480975	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.99	■■■□□ 2.87
GNAS-238	ENST00000480975	AQR	O60306	1485 aa	Known RBP eCLIP	32.95	■■■□□ 2.86	6e-9	■■■■□ 21.8
GNAS-238	ENST00000480975	WDR97	A6NE52	1622 aa		32.94	■■■□□ 2.86
GNAS-238	ENST00000480975	KIF27	Q86VH2	1401 aa		32.92	■■■□□ 2.86
GNAS-238	ENST00000480975	GAPVD1	Q14C86	1478 aa		32.89	■■■□□ 2.86
GNAS-238	ENST00000480975	EIF4G3	O43432	1585 aa	Known RBP	32.87	■■■□□ 2.85
GNAS-238	ENST00000480975	ABCA5	Q8WWZ7	1642 aa		32.81	■■■□□ 2.84
GNAS-238	ENST00000480975	GRIN2B	Q13224	1484 aa		32.79	■■■□□ 2.84
GNAS-238	ENST00000480975	RUSC2	Q8N2Y8	1516 aa		32.73	■■■□□ 2.83
GNAS-238	ENST00000480975	EEA1	Q15075	1411 aa		32.71	■■■□□ 2.83
GNAS-238	ENST00000480975	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.7	■■■□□ 2.83
GNAS-238	ENST00000480975	PBRM1	Q86U86	1689 aa		32.69	■■■□□ 2.82
GNAS-238	ENST00000480975	ERICH3	Q5RHP9	1530 aa		32.69	■■■□□ 2.82
GNAS-238	ENST00000480975	IGF1R	P08069	1367 aa		32.67	■■■□□ 2.82
GNAS-238	ENST00000480975	CSRNP3	Q8WYN3	585 aa		32.63	■■■□□ 2.81
GNAS-238	ENST00000480975	SNAPC4	Q5SXM2	1469 aa		32.63	■■■□□ 2.81
GNAS-238	ENST00000480975	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.62	■■■□□ 2.81
GNAS-238	ENST00000480975	FBLN2	P98095	1184 aa		32.58	■■■□□ 2.81
GNAS-238	ENST00000480975	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.56	■■■□□ 2.8
GNAS-238	ENST00000480975	FHAD1	B1AJZ9	1412 aa		32.53	■■■□□ 2.8
GNAS-238	ENST00000480975	CARMIL1	Q5VZK9	1371 aa		32.53	■■■□□ 2.8
GNAS-238	ENST00000480975	CUL7	Q14999	1698 aa		32.51	■■■□□ 2.79
GNAS-238	ENST00000480975	SYNJ2	O15056	1496 aa		32.49	■■■□□ 2.79
GNAS-238	ENST00000480975	ADAMTS12	P58397	1594 aa		32.47	■■■□□ 2.79
GNAS-238	ENST00000480975	RAPGEF2	Q9Y4G8	1499 aa		32.38	■■■□□ 2.77
GNAS-238	ENST00000480975	PRX	Q9BXM0	1461 aa		32.36	■■■□□ 2.77
GNAS-238	ENST00000480975	GRIN2A	Q12879	1464 aa		32.34	■■■□□ 2.77
GNAS-238	ENST00000480975	CHD1	O14646	1710 aa		32.33	■■■□□ 2.77
GNAS-238	ENST00000480975	OSCAR	Q8IYS5	282 aa		32.32	■■■□□ 2.76
GNAS-238	ENST00000480975	EHMT2	Q96KQ7	1210 aa		32.24	■■■□□ 2.75
GNAS-238	ENST00000480975	KIF21B	O75037	1637 aa		32.24	■■■□□ 2.75
GNAS-238	ENST00000480975	UBTF	P17480	764 aa	Known RBP	32.17	■■■□□ 2.74
GNAS-238	ENST00000480975	GOLGA3	Q08378	1498 aa		32.17	■■■□□ 2.74
GNAS-238	ENST00000480975	NUP160	Q12769	1436 aa		32.14	■■■□□ 2.74
GNAS-238	ENST00000480975	CEP170	Q5SW79	1584 aa		32.1	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 330.9 ms