Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.49■■□□□ 1.83
VPS36Q86VN1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.49■■□□□ 1.83
VPS36Q86VN1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
VPS36Q86VN1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS36Q86VN1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS36Q86VN1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS36Q86VN1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS36Q86VN1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
VPS36Q86VN1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.46■■□□□ 1.83
VPS36Q86VN1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS36Q86VN1 MIR7108-201ENST00000614319 87 ntBASIC26.45■■□□□ 1.82
VPS36Q86VN1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS36Q86VN1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS36Q86VN1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.44■■□□□ 1.82
VPS36Q86VN1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.44■■□□□ 1.82
VPS36Q86VN1 AC092803.2-201ENST00000564287 1899 ntBASIC26.44■■□□□ 1.82
VPS36Q86VN1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS36Q86VN1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS36Q86VN1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS36Q86VN1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS36Q86VN1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
VPS36Q86VN1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS36Q86VN1 LINC01971-201ENST00000617888 1048 ntBASIC26.42■■□□□ 1.82
VPS36Q86VN1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.42■■□□□ 1.82
VPS36Q86VN1 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS36Q86VN1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS36Q86VN1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS36Q86VN1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS36Q86VN1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS36Q86VN1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS36Q86VN1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS36Q86VN1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.39■■□□□ 1.82
VPS36Q86VN1 DUSP8P4-201ENST00000399538 1761 ntBASIC26.38■■□□□ 1.81
VPS36Q86VN1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.38■■□□□ 1.81
VPS36Q86VN1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS36Q86VN1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS36Q86VN1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS36Q86VN1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS36Q86VN1 ZNRF2P2-203ENST00000454624 420 ntBASIC26.37■■□□□ 1.81
VPS36Q86VN1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
VPS36Q86VN1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.36■■□□□ 1.81
VPS36Q86VN1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS36Q86VN1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
VPS36Q86VN1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS36Q86VN1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS36Q86VN1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.35■■□□□ 1.81
VPS36Q86VN1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS36Q86VN1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VPS36Q86VN1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
VPS36Q86VN1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VPS36Q86VN1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.34■■□□□ 1.81
VPS36Q86VN1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS36Q86VN1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.33■■□□□ 1.81
VPS36Q86VN1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
VPS36Q86VN1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS36Q86VN1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
VPS36Q86VN1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS36Q86VN1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
VPS36Q86VN1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS36Q86VN1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS36Q86VN1 AC008813.1-201ENST00000536597 885 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L13-201ENST00000554103 1267 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L15-201ENST00000611059 1267 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L23-201ENST00000615195 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L24-201ENST00000617576 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L22-201ENST00000618238 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L20-201ENST00000619712 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L21-201ENST00000622058 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L10-201ENST00000622460 1267 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 DUX4L25-201ENST00000624915 1269 ntBASIC26.32■■□□□ 1.8
VPS36Q86VN1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS36Q86VN1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
VPS36Q86VN1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS36Q86VN1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS36Q86VN1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS36Q86VN1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
VPS36Q86VN1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.31■■□□□ 1.8
VPS36Q86VN1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS36Q86VN1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS36Q86VN1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS36Q86VN1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS36Q86VN1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS36Q86VN1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS36Q86VN1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.3■■□□□ 1.8
VPS36Q86VN1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS36Q86VN1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS36Q86VN1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS36Q86VN1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.29■■□□□ 1.8
VPS36Q86VN1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VPS36Q86VN1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS36Q86VN1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.29■■□□□ 1.8
VPS36Q86VN1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS36Q86VN1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS36Q86VN1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms