Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PVT1_1.1-201ENST00000615125 194 ntBASIC15.55■□□□□ 0.08
VPS13BQ7Z7G8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13BQ7Z7G8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 ABCB10P1-201ENST00000614297 2181 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC103724.3-201ENST00000564481 992 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AL139393.2-201ENST00000608721 2025 ntBASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
VPS13BQ7Z7G8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.52■□□□□ 0.08
VPS13BQ7Z7G8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 MIR4508-201ENST00000584178 70 ntBASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 SMPD5-203ENST00000639008 1464 ntBASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13BQ7Z7G8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS13BQ7Z7G8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VPS13BQ7Z7G8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS13BQ7Z7G8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS13BQ7Z7G8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 Z92544.1-202ENST00000571933 1220 ntBASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS13BQ7Z7G8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 MIR6765-201ENST00000614092 87 ntBASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 AL359258.2-201ENST00000564063 1566 ntBASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS13BQ7Z7G8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.46■□□□□ 0.06
VPS13BQ7Z7G8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 AC074183.2-201ENST00000623112 922 ntBASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.45■□□□□ 0.06
VPS13BQ7Z7G8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.44■□□□□ 0.06
VPS13BQ7Z7G8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms