Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 AC139795.1-202ENST00000500444 432 ntBASIC25.99■■□□□ 1.75
DENND4AQ7Z401 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DENND4AQ7Z401 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.98■■□□□ 1.75
DENND4AQ7Z401 ST7-AS1-201ENST00000456775 1889 ntBASIC25.98■■□□□ 1.75
DENND4AQ7Z401 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DENND4AQ7Z401 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.98■■□□□ 1.75
DENND4AQ7Z401 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DENND4AQ7Z401 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 GUSBP5-201ENST00000418136 578 ntBASIC25.97■■□□□ 1.75
DENND4AQ7Z401 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DENND4AQ7Z401 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 AC103724.3-201ENST00000564481 992 ntBASIC25.96■■□□□ 1.75
DENND4AQ7Z401 MIR3960-201ENST00000583311 91 ntBASIC25.96■■□□□ 1.75
DENND4AQ7Z401 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.96■■□□□ 1.75
DENND4AQ7Z401 AC074183.2-201ENST00000623112 922 ntBASIC25.96■■□□□ 1.75
DENND4AQ7Z401 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DENND4AQ7Z401 AC131212.1-201ENST00000613771 668 ntBASIC25.95■■□□□ 1.74
DENND4AQ7Z401 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
DENND4AQ7Z401 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DENND4AQ7Z401 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DENND4AQ7Z401 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DENND4AQ7Z401 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.93■■□□□ 1.74
DENND4AQ7Z401 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DENND4AQ7Z401 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DENND4AQ7Z401 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.92■■□□□ 1.74
DENND4AQ7Z401 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
DENND4AQ7Z401 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
DENND4AQ7Z401 AC103834.1-201ENST00000520383 144 ntBASIC25.91■■□□□ 1.74
DENND4AQ7Z401 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.91■■□□□ 1.74
DENND4AQ7Z401 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.89■■□□□ 1.74
DENND4AQ7Z401 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.89■■□□□ 1.73
DENND4AQ7Z401 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.89■■□□□ 1.73
DENND4AQ7Z401 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.89■■□□□ 1.73
DENND4AQ7Z401 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DENND4AQ7Z401 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DENND4AQ7Z401 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.88■■□□□ 1.73
DENND4AQ7Z401 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.88■■□□□ 1.73
DENND4AQ7Z401 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DENND4AQ7Z401 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DENND4AQ7Z401 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
DENND4AQ7Z401 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DENND4AQ7Z401 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DENND4AQ7Z401 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.87■■□□□ 1.73
DENND4AQ7Z401 BHLHE23-202ENST00000612929 1109 ntBASIC25.87■■□□□ 1.73
DENND4AQ7Z401 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
DENND4AQ7Z401 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DENND4AQ7Z401 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
DENND4AQ7Z401 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
DENND4AQ7Z401 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
DENND4AQ7Z401 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
DENND4AQ7Z401 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DENND4AQ7Z401 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
DENND4AQ7Z401 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
DENND4AQ7Z401 YBX1P4-201ENST00000392794 808 ntBASIC25.83■■□□□ 1.72
DENND4AQ7Z401 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.83■■□□□ 1.72
DENND4AQ7Z401 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.82■■□□□ 1.72
DENND4AQ7Z401 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DENND4AQ7Z401 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
DENND4AQ7Z401 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
DENND4AQ7Z401 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
DENND4AQ7Z401 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms