Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.3■■■□□ 2.44
TTC39AQ5SRH9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC39AQ5SRH9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC39AQ5SRH9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC39AQ5SRH9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC39AQ5SRH9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
TTC39AQ5SRH9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TTC39AQ5SRH9 ABHD17AP5-201ENST00000580133 923 ntBASIC30.28■■■□□ 2.44
TTC39AQ5SRH9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TTC39AQ5SRH9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TTC39AQ5SRH9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TTC39AQ5SRH9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TTC39AQ5SRH9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
TTC39AQ5SRH9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.26■■■□□ 2.43
TTC39AQ5SRH9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TTC39AQ5SRH9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TTC39AQ5SRH9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TTC39AQ5SRH9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
TTC39AQ5SRH9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TTC39AQ5SRH9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TTC39AQ5SRH9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
TTC39AQ5SRH9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TTC39AQ5SRH9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.23■■■□□ 2.43
TTC39AQ5SRH9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
TTC39AQ5SRH9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.22■■■□□ 2.43
TTC39AQ5SRH9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.22■■■□□ 2.43
TTC39AQ5SRH9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TTC39AQ5SRH9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TTC39AQ5SRH9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
TTC39AQ5SRH9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TTC39AQ5SRH9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 SMPD5-203ENST00000639008 1464 ntBASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.19■■■□□ 2.42
TTC39AQ5SRH9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TTC39AQ5SRH9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TTC39AQ5SRH9 AL449106.1-201ENST00000608517 1980 ntBASIC30.17■■■□□ 2.42
TTC39AQ5SRH9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.17■■■□□ 2.42
TTC39AQ5SRH9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.16■■■□□ 2.42
TTC39AQ5SRH9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.16■■■□□ 2.42
TTC39AQ5SRH9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.15■■■□□ 2.42
TTC39AQ5SRH9 AC025884.2-201ENST00000553429 711 ntBASIC30.15■■■□□ 2.42
TTC39AQ5SRH9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TTC39AQ5SRH9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TTC39AQ5SRH9 AL359504.2-201ENST00000605506 1601 ntBASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 AC007029.1-201ENST00000604183 313 ntBASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TTC39AQ5SRH9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
TTC39AQ5SRH9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TTC39AQ5SRH9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TTC39AQ5SRH9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TTC39AQ5SRH9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.1■■■□□ 2.41
TTC39AQ5SRH9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.1■■■□□ 2.41
TTC39AQ5SRH9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TTC39AQ5SRH9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TTC39AQ5SRH9 NTF6A-201ENST00000591175 560 ntBASIC30.09■■■□□ 2.41
TTC39AQ5SRH9 U85056.1-201ENST00000616429 682 ntBASIC30.09■■■□□ 2.41
TTC39AQ5SRH9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TTC39AQ5SRH9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
TTC39AQ5SRH9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TTC39AQ5SRH9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
TTC39AQ5SRH9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.08■■■□□ 2.41
TTC39AQ5SRH9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.08■■■□□ 2.41
TTC39AQ5SRH9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
TTC39AQ5SRH9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
TTC39AQ5SRH9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TTC39AQ5SRH9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.06■■■□□ 2.4
TTC39AQ5SRH9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TTC39AQ5SRH9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
TTC39AQ5SRH9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC39AQ5SRH9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.03■■■□□ 2.4
TTC39AQ5SRH9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC39AQ5SRH9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC39AQ5SRH9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC39AQ5SRH9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms