Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CLCNKAP51800 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CLCNKAP51800 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
CLCNKAP51800 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CLCNKAP51800 BX255925.1-201ENST00000566954 1854 ntBASIC24.32■■□□□ 1.48
CLCNKAP51800 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLCNKAP51800 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.32■■□□□ 1.48
CLCNKAP51800 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLCNKAP51800 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.32■■□□□ 1.48
CLCNKAP51800 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLCNKAP51800 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLCNKAP51800 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.32■■□□□ 1.48
CLCNKAP51800 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CLCNKAP51800 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLCNKAP51800 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLCNKAP51800 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLCNKAP51800 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CLCNKAP51800 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.3■■□□□ 1.48
CLCNKAP51800 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CLCNKAP51800 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CLCNKAP51800 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.29■■□□□ 1.48
CLCNKAP51800 WHAMMP3-201ENST00000611636 1609 ntBASIC24.28■■□□□ 1.48
CLCNKAP51800 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CLCNKAP51800 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.28■■□□□ 1.48
CLCNKAP51800 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CLCNKAP51800 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.28■■□□□ 1.48
CLCNKAP51800 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CLCNKAP51800 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CLCNKAP51800 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CLCNKAP51800 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CLCNKAP51800 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.26■■□□□ 1.47
CLCNKAP51800 AC025884.2-201ENST00000553429 711 ntBASIC24.26■■□□□ 1.47
CLCNKAP51800 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.25■■□□□ 1.47
CLCNKAP51800 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.25■■□□□ 1.47
CLCNKAP51800 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CLCNKAP51800 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.25■■□□□ 1.47
CLCNKAP51800 SMPD5-203ENST00000639008 1464 ntBASIC24.24■■□□□ 1.47
CLCNKAP51800 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CLCNKAP51800 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.23■■□□□ 1.47
CLCNKAP51800 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CLCNKAP51800 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.23■■□□□ 1.47
CLCNKAP51800 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CLCNKAP51800 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CLCNKAP51800 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CLCNKAP51800 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CLCNKAP51800 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CLCNKAP51800 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CLCNKAP51800 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CLCNKAP51800 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.21■■□□□ 1.47
CLCNKAP51800 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.21■■□□□ 1.47
CLCNKAP51800 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
CLCNKAP51800 NTF6A-201ENST00000591175 560 ntBASIC24.21■■□□□ 1.47
CLCNKAP51800 AC007029.1-201ENST00000604183 313 ntBASIC24.21■■□□□ 1.47
CLCNKAP51800 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
CLCNKAP51800 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CLCNKAP51800 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CLCNKAP51800 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CLCNKAP51800 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CLCNKAP51800 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.2■■□□□ 1.46
CLCNKAP51800 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.19■■□□□ 1.46
CLCNKAP51800 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CLCNKAP51800 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CLCNKAP51800 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.19■■□□□ 1.46
CLCNKAP51800 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CLCNKAP51800 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CLCNKAP51800 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.18■■□□□ 1.46
CLCNKAP51800 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
CLCNKAP51800 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.18■■□□□ 1.46
CLCNKAP51800 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.18■■□□□ 1.46
CLCNKAP51800 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.18■■□□□ 1.46
CLCNKAP51800 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCNKAP51800 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCNKAP51800 AL449106.1-201ENST00000608517 1980 ntBASIC24.18■■□□□ 1.46
CLCNKAP51800 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLCNKAP51800 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CLCNKAP51800 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.17■■□□□ 1.46
CLCNKAP51800 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.17■■□□□ 1.46
CLCNKAP51800 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLCNKAP51800 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCNKAP51800 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CLCNKAP51800 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCNKAP51800 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCNKAP51800 U85056.1-201ENST00000616429 682 ntBASIC24.15■■□□□ 1.46
CLCNKAP51800 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CLCNKAP51800 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CLCNKAP51800 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCNKAP51800 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLCNKAP51800 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.14■■□□□ 1.45
CLCNKAP51800 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.14■■□□□ 1.45
CLCNKAP51800 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CLCNKAP51800 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.13■■□□□ 1.45
CLCNKAP51800 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CLCNKAP51800 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CLCNKAP51800 MIR3960-201ENST00000583311 91 ntBASIC24.13■■□□□ 1.45
CLCNKAP51800 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CLCNKAP51800 AL359504.2-201ENST00000605506 1601 ntBASIC24.13■■□□□ 1.45
CLCNKAP51800 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms