Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.47■■□□□ 1.99
RFC5P40937 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RFC5P40937 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.47■■□□□ 1.99
RFC5P40937 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
RFC5P40937 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.46■■□□□ 1.99
RFC5P40937 SMPD5-203ENST00000639008 1464 ntBASIC27.46■■□□□ 1.99
RFC5P40937 AC025884.2-201ENST00000553429 711 ntBASIC27.46■■□□□ 1.99
RFC5P40937 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
RFC5P40937 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RFC5P40937 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RFC5P40937 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.45■■□□□ 1.98
RFC5P40937 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.45■■□□□ 1.98
RFC5P40937 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.45■■□□□ 1.98
RFC5P40937 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.44■■□□□ 1.98
RFC5P40937 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.44■■□□□ 1.98
RFC5P40937 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.44■■□□□ 1.98
RFC5P40937 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.44■■□□□ 1.98
RFC5P40937 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RFC5P40937 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFC5P40937 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFC5P40937 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
RFC5P40937 AC007029.1-201ENST00000604183 313 ntBASIC27.43■■□□□ 1.98
RFC5P40937 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.42■■□□□ 1.98
RFC5P40937 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
RFC5P40937 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.42■■□□□ 1.98
RFC5P40937 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RFC5P40937 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.42■■□□□ 1.98
RFC5P40937 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
RFC5P40937 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.41■■□□□ 1.98
RFC5P40937 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RFC5P40937 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFC5P40937 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.41■■□□□ 1.98
RFC5P40937 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RFC5P40937 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.41■■□□□ 1.98
RFC5P40937 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RFC5P40937 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
RFC5P40937 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RFC5P40937 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
RFC5P40937 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.4■■□□□ 1.98
RFC5P40937 NTF6A-201ENST00000591175 560 ntBASIC27.4■■□□□ 1.98
RFC5P40937 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.4■■□□□ 1.98
RFC5P40937 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
RFC5P40937 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
RFC5P40937 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
RFC5P40937 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
RFC5P40937 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
RFC5P40937 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
RFC5P40937 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.37■■□□□ 1.97
RFC5P40937 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RFC5P40937 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
RFC5P40937 AL359504.2-201ENST00000605506 1601 ntBASIC27.37■■□□□ 1.97
RFC5P40937 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RFC5P40937 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RFC5P40937 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RFC5P40937 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFC5P40937 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
RFC5P40937 U85056.1-201ENST00000616429 682 ntBASIC27.35■■□□□ 1.97
RFC5P40937 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RFC5P40937 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFC5P40937 AL449106.1-201ENST00000608517 1980 ntBASIC27.35■■□□□ 1.97
RFC5P40937 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RFC5P40937 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RFC5P40937 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.34■■□□□ 1.97
RFC5P40937 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
RFC5P40937 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RFC5P40937 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
RFC5P40937 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFC5P40937 MIR3960-201ENST00000583311 91 ntBASIC27.33■■□□□ 1.97
RFC5P40937 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RFC5P40937 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RFC5P40937 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
RFC5P40937 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC5P40937 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.32■■□□□ 1.96
RFC5P40937 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.32■■□□□ 1.96
RFC5P40937 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.31■■□□□ 1.96
RFC5P40937 RP9P-202ENST00000450133 1212 ntBASIC27.31■■□□□ 1.96
RFC5P40937 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFC5P40937 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFC5P40937 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.31■■□□□ 1.96
RFC5P40937 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RFC5P40937 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RFC5P40937 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFC5P40937 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.29■■□□□ 1.96
RFC5P40937 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RFC5P40937 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.28■■□□□ 1.96
RFC5P40937 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.28■■□□□ 1.96
RFC5P40937 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFC5P40937 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC5P40937 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RFC5P40937 AC093536.1-201ENST00000569153 554 ntBASIC27.27■■□□□ 1.96
RFC5P40937 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
RFC5P40937 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
RFC5P40937 AC009831.1-201ENST00000580420 1582 ntBASIC27.26■■□□□ 1.96
RFC5P40937 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC5P40937 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFC5P40937 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC5P40937 AC026202.3-201ENST00000600805 1127 ntBASIC27.26■■□□□ 1.95
RFC5P40937 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RFC5P40937 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RFC5P40937 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms