Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.49■■■□□ 2.63
TM4SF1P30408 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.49■■■□□ 2.63
TM4SF1P30408 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TM4SF1P30408 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.49■■■□□ 2.63
TM4SF1P30408 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.48■■■□□ 2.63
TM4SF1P30408 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.48■■■□□ 2.63
TM4SF1P30408 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.47■■■□□ 2.63
TM4SF1P30408 MIR3960-201ENST00000583311 91 ntBASIC31.47■■■□□ 2.63
TM4SF1P30408 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TM4SF1P30408 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.47■■■□□ 2.63
TM4SF1P30408 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
TM4SF1P30408 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.45■■■□□ 2.63
TM4SF1P30408 AC139795.1-202ENST00000500444 432 ntBASIC31.45■■■□□ 2.63
TM4SF1P30408 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TM4SF1P30408 YBX1P4-201ENST00000392794 808 ntBASIC31.44■■■□□ 2.62
TM4SF1P30408 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
TM4SF1P30408 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TM4SF1P30408 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TM4SF1P30408 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TM4SF1P30408 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TM4SF1P30408 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.43■■■□□ 2.62
TM4SF1P30408 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.43■■■□□ 2.62
TM4SF1P30408 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TM4SF1P30408 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TM4SF1P30408 GUSBP5-201ENST00000418136 578 ntBASIC31.42■■■□□ 2.62
TM4SF1P30408 AC019069.1-201ENST00000610008 1333 ntBASIC31.42■■■□□ 2.62
TM4SF1P30408 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.41■■■□□ 2.62
TM4SF1P30408 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TM4SF1P30408 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TM4SF1P30408 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TM4SF1P30408 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
TM4SF1P30408 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.41■■■□□ 2.62
TM4SF1P30408 MIR4508-201ENST00000584178 70 ntBASIC31.41■■■□□ 2.62
TM4SF1P30408 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TM4SF1P30408 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.4■■■□□ 2.62
TM4SF1P30408 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
TM4SF1P30408 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TM4SF1P30408 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TM4SF1P30408 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TM4SF1P30408 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TM4SF1P30408 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.38■■■□□ 2.61
TM4SF1P30408 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TM4SF1P30408 AC018755.3-202ENST00000596210 929 ntBASIC31.38■■■□□ 2.61
TM4SF1P30408 AC131212.1-201ENST00000613771 668 ntBASIC31.38■■■□□ 2.61
TM4SF1P30408 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
TM4SF1P30408 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
TM4SF1P30408 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TM4SF1P30408 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.38■■■□□ 2.61
TM4SF1P30408 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TM4SF1P30408 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.37■■■□□ 2.61
TM4SF1P30408 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TM4SF1P30408 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.37■■■□□ 2.61
TM4SF1P30408 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.37■■■□□ 2.61
TM4SF1P30408 THA1P-201ENST00000590384 1145 ntBASIC31.37■■■□□ 2.61
TM4SF1P30408 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.36■■■□□ 2.61
TM4SF1P30408 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TM4SF1P30408 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TM4SF1P30408 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.36■■■□□ 2.61
TM4SF1P30408 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TM4SF1P30408 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TM4SF1P30408 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TM4SF1P30408 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.34■■■□□ 2.61
TM4SF1P30408 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TM4SF1P30408 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TM4SF1P30408 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.34■■■□□ 2.61
TM4SF1P30408 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TM4SF1P30408 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
TM4SF1P30408 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
TM4SF1P30408 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.33■■■□□ 2.61
TM4SF1P30408 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.33■■■□□ 2.61
TM4SF1P30408 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TM4SF1P30408 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TM4SF1P30408 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TM4SF1P30408 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.32■■■□□ 2.6
TM4SF1P30408 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TM4SF1P30408 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TM4SF1P30408 AC103724.3-201ENST00000564481 992 ntBASIC31.3■■■□□ 2.6
TM4SF1P30408 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.29■■■□□ 2.6
TM4SF1P30408 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TM4SF1P30408 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
TM4SF1P30408 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TM4SF1P30408 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.29■■■□□ 2.6
TM4SF1P30408 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.29■■■□□ 2.6
TM4SF1P30408 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.29■■■□□ 2.6
TM4SF1P30408 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TM4SF1P30408 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.28■■■□□ 2.6
TM4SF1P30408 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TM4SF1P30408 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
TM4SF1P30408 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
TM4SF1P30408 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TM4SF1P30408 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.27■■■□□ 2.6
TM4SF1P30408 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.26■■■□□ 2.59
TM4SF1P30408 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TM4SF1P30408 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
TM4SF1P30408 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
TM4SF1P30408 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.24■■■□□ 2.59
TM4SF1P30408 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
TM4SF1P30408 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TM4SF1P30408 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.23■■■□□ 2.59
TM4SF1P30408 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms