Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 AC142381.3-201ENST00000568208 1670 ntBASIC21.03■□□□□ 0.96
TCRBP04435 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBP04435 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TCRBP04435 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TCRBP04435 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBP04435 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.02■□□□□ 0.96
TCRBP04435 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TCRBP04435 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TCRBP04435 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBP04435 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBP04435 AP004609.3-201ENST00000610705 1884 ntBASIC21.01■□□□□ 0.95
TCRBP04435 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TCRBP04435 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBP04435 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TCRBP04435 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TCRBP04435 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.01■□□□□ 0.95
TCRBP04435 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
TCRBP04435 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBP04435 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBP04435 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TCRBP04435 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
TCRBP04435 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBP04435 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBP04435 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBP04435 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.99■□□□□ 0.95
TCRBP04435 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
TCRBP04435 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBP04435 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBP04435 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBP04435 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBP04435 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBP04435 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.98■□□□□ 0.95
TCRBP04435 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBP04435 AL139125.2-201ENST00000623134 1869 ntBASIC20.98■□□□□ 0.95
TCRBP04435 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.97■□□□□ 0.95
TCRBP04435 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBP04435 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBP04435 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBP04435 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBP04435 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TCRBP04435 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBP04435 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBP04435 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.96■□□□□ 0.95
TCRBP04435 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBP04435 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TCRBP04435 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBP04435 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBP04435 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBP04435 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TCRBP04435 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TCRBP04435 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBP04435 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBP04435 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.95■□□□□ 0.94
TCRBP04435 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TCRBP04435 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.94■□□□□ 0.94
TCRBP04435 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBP04435 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TCRBP04435 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TCRBP04435 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TCRBP04435 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.93■□□□□ 0.94
TCRBP04435 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBP04435 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBP04435 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.93■□□□□ 0.94
TCRBP04435 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.93■□□□□ 0.94
TCRBP04435 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBP04435 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBP04435 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TCRBP04435 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBP04435 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.92■□□□□ 0.94
TCRBP04435 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.92■□□□□ 0.94
TCRBP04435 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBP04435 AL133380.1-201ENST00000506013 324 ntBASIC20.92■□□□□ 0.94
TCRBP04435 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBP04435 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBP04435 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TCRBP04435 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TCRBP04435 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBP04435 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBP04435 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBP04435 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBP04435 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.91■□□□□ 0.94
TCRBP04435 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TCRBP04435 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TCRBP04435 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBP04435 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TCRBP04435 ZNRF2P1-201ENST00000441407 443 ntBASIC20.9■□□□□ 0.94
TCRBP04435 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBP04435 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBP04435 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.9■□□□□ 0.94
TCRBP04435 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TCRBP04435 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBP04435 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TCRBP04435 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBP04435 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TCRBP04435 AC138932.3-201ENST00000567634 1902 ntBASIC20.88■□□□□ 0.93
TCRBP04435 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.88■□□□□ 0.93
TCRBP04435 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBP04435 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TCRBP04435 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TCRBP04435 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 230.2 ms