Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 GUSBP5-201ENST00000418136 578 ntBASIC28.38■■■□□ 2.13
HMGCRP04035 THA1P-201ENST00000590384 1145 ntBASIC28.38■■■□□ 2.13
HMGCRP04035 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
HMGCRP04035 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HMGCRP04035 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.37■■■□□ 2.13
HMGCRP04035 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HMGCRP04035 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.37■■■□□ 2.13
HMGCRP04035 AP004833.2-201ENST00000532228 1454 ntBASIC28.36■■■□□ 2.13
HMGCRP04035 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.36■■■□□ 2.13
HMGCRP04035 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
HMGCRP04035 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
HMGCRP04035 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.36■■■□□ 2.13
HMGCRP04035 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.36■■■□□ 2.13
HMGCRP04035 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HMGCRP04035 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.35■■■□□ 2.13
HMGCRP04035 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.35■■■□□ 2.13
HMGCRP04035 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
HMGCRP04035 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.34■■■□□ 2.13
HMGCRP04035 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.34■■■□□ 2.13
HMGCRP04035 MIR3960-201ENST00000583311 91 ntBASIC28.34■■■□□ 2.13
HMGCRP04035 PVT1_1.1-201ENST00000615125 194 ntBASIC28.34■■■□□ 2.13
HMGCRP04035 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HMGCRP04035 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
HMGCRP04035 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HMGCRP04035 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HMGCRP04035 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HMGCRP04035 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HMGCRP04035 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.32■■■□□ 2.12
HMGCRP04035 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HMGCRP04035 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HMGCRP04035 MIR4508-201ENST00000584178 70 ntBASIC28.31■■■□□ 2.12
HMGCRP04035 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
HMGCRP04035 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HMGCRP04035 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.31■■■□□ 2.12
HMGCRP04035 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.31■■■□□ 2.12
HMGCRP04035 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.3■■■□□ 2.12
HMGCRP04035 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HMGCRP04035 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
HMGCRP04035 AC018755.3-202ENST00000596210 929 ntBASIC28.3■■■□□ 2.12
HMGCRP04035 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HMGCRP04035 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HMGCRP04035 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
HMGCRP04035 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.28■■■□□ 2.12
HMGCRP04035 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.28■■■□□ 2.12
HMGCRP04035 AC100797.4-201ENST00000631653 1827 ntBASIC28.27■■■□□ 2.12
HMGCRP04035 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HMGCRP04035 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.27■■■□□ 2.12
HMGCRP04035 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HMGCRP04035 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.27■■■□□ 2.12
HMGCRP04035 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HMGCRP04035 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HMGCRP04035 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.25■■■□□ 2.11
HMGCRP04035 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
HMGCRP04035 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HMGCRP04035 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
HMGCRP04035 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HMGCRP04035 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
HMGCRP04035 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
HMGCRP04035 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
HMGCRP04035 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGCRP04035 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGCRP04035 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.23■■■□□ 2.11
HMGCRP04035 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.23■■■□□ 2.11
HMGCRP04035 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGCRP04035 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
HMGCRP04035 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HMGCRP04035 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
HMGCRP04035 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
HMGCRP04035 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.22■■■□□ 2.11
HMGCRP04035 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
HMGCRP04035 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.21■■■□□ 2.11
HMGCRP04035 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.21■■■□□ 2.11
HMGCRP04035 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.21■■■□□ 2.11
HMGCRP04035 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.21■■■□□ 2.11
HMGCRP04035 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
HMGCRP04035 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.2■■■□□ 2.11
HMGCRP04035 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
HMGCRP04035 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.2■■■□□ 2.1
HMGCRP04035 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
HMGCRP04035 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.2■■■□□ 2.1
HMGCRP04035 AL356441.2-201ENST00000443009 864 ntBASIC28.2■■■□□ 2.1
HMGCRP04035 AL031848.2-201ENST00000607670 837 ntBASIC28.2■■■□□ 2.1
HMGCRP04035 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HMGCRP04035 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
HMGCRP04035 AC103724.3-201ENST00000564481 992 ntBASIC28.19■■■□□ 2.1
HMGCRP04035 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.18■■■□□ 2.1
HMGCRP04035 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
HMGCRP04035 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
HMGCRP04035 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HMGCRP04035 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMGCRP04035 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
HMGCRP04035 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.16■■■□□ 2.1
HMGCRP04035 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
HMGCRP04035 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMGCRP04035 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
HMGCRP04035 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HMGCRP04035 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.15■■■□□ 2.1
HMGCRP04035 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.15■■■□□ 2.1
HMGCRP04035 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
HMGCRP04035 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms