Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHKB-CPT1BH3BT56 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CHKB-CPT1BH3BT56 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHKB-CPT1BH3BT56 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14□□□□□ -0.17
CHKB-CPT1BH3BT56 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC14□□□□□ -0.17
CHKB-CPT1BH3BT56 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CHKB-CPT1BH3BT56 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 AC120057.4-201ENST00000624722 1615 ntBASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHKB-CPT1BH3BT56 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CHKB-CPT1BH3BT56 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHKB-CPT1BH3BT56 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CHKB-CPT1BH3BT56 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.96□□□□□ -0.18
CHKB-CPT1BH3BT56 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CHKB-CPT1BH3BT56 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHKB-CPT1BH3BT56 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHKB-CPT1BH3BT56 AC093323.1-202ENST00000635031 2045 ntBASIC13.93□□□□□ -0.18
CHKB-CPT1BH3BT56 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.93□□□□□ -0.18
CHKB-CPT1BH3BT56 LINC00543-201ENST00000567234 1845 ntBASIC13.93□□□□□ -0.18
CHKB-CPT1BH3BT56 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHKB-CPT1BH3BT56 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 AL449106.1-201ENST00000608517 1980 ntBASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHKB-CPT1BH3BT56 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHKB-CPT1BH3BT56 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHKB-CPT1BH3BT56 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms