Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBFOX3A6NFN3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 AC127502.1-201ENST00000399971 1502 ntBASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 AC142381.3-201ENST00000568208 1670 ntBASIC19.49■□□□□ 0.71
RBFOX3A6NFN3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBFOX3A6NFN3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RBFOX3A6NFN3 ZNRF2P1-201ENST00000441407 443 ntBASIC19.48■□□□□ 0.71
RBFOX3A6NFN3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBFOX3A6NFN3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.48■□□□□ 0.71
RBFOX3A6NFN3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RBFOX3A6NFN3 AC018358.1-201ENST00000631079 1402 ntBASIC19.47■□□□□ 0.71
RBFOX3A6NFN3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBFOX3A6NFN3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBFOX3A6NFN3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBFOX3A6NFN3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RBFOX3A6NFN3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBFOX3A6NFN3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RBFOX3A6NFN3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 LINC00543-201ENST00000567234 1845 ntBASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RBFOX3A6NFN3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 AL139125.2-201ENST00000623134 1869 ntBASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RBFOX3A6NFN3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.42■□□□□ 0.7
RBFOX3A6NFN3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RBFOX3A6NFN3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RBFOX3A6NFN3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.41■□□□□ 0.7
RBFOX3A6NFN3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 AC079834.2-201ENST00000609776 1949 ntBASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.4■□□□□ 0.7
RBFOX3A6NFN3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RBFOX3A6NFN3 AP004609.3-201ENST00000610705 1884 ntBASIC19.39■□□□□ 0.69
RBFOX3A6NFN3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RBFOX3A6NFN3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RBFOX3A6NFN3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBFOX3A6NFN3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RBFOX3A6NFN3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RBFOX3A6NFN3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RBFOX3A6NFN3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RBFOX3A6NFN3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBFOX3A6NFN3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBFOX3A6NFN3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RBFOX3A6NFN3 AC068473.5-201ENST00000616428 2072 ntBASIC19.36■□□□□ 0.69
RBFOX3A6NFN3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RBFOX3A6NFN3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RBFOX3A6NFN3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBFOX3A6NFN3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RBFOX3A6NFN3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 DYNLL1-208ENST00000550178 581 ntBASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RBFOX3A6NFN3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.34■□□□□ 0.69
RBFOX3A6NFN3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms