Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC187A0A096LP49 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC187A0A096LP49 SPCS2P3-201ENST00000500401 656 ntBASIC23.72■■□□□ 1.39
CCDC187A0A096LP49 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.72■■□□□ 1.39
CCDC187A0A096LP49 MIR6765-201ENST00000614092 87 ntBASIC23.72■■□□□ 1.39
CCDC187A0A096LP49 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC187A0A096LP49 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC187A0A096LP49 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC187A0A096LP49 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CCDC187A0A096LP49 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.71■■□□□ 1.39
CCDC187A0A096LP49 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CCDC187A0A096LP49 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC187A0A096LP49 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC187A0A096LP49 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC187A0A096LP49 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC187A0A096LP49 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC187A0A096LP49 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC187A0A096LP49 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC187A0A096LP49 KRT8P33-201ENST00000508125 1423 ntBASIC23.68■■□□□ 1.38
CCDC187A0A096LP49 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCDC187A0A096LP49 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC187A0A096LP49 AP002414.2-202ENST00000590929 1450 ntBASIC23.68■■□□□ 1.38
CCDC187A0A096LP49 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CCDC187A0A096LP49 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC187A0A096LP49 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC187A0A096LP49 AC018755.3-202ENST00000596210 929 ntBASIC23.67■■□□□ 1.38
CCDC187A0A096LP49 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC187A0A096LP49 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC187A0A096LP49 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC187A0A096LP49 YBX1P4-201ENST00000392794 808 ntBASIC23.66■■□□□ 1.38
CCDC187A0A096LP49 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC187A0A096LP49 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC187A0A096LP49 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC187A0A096LP49 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 ABCB10P3-201ENST00000561950 2166 ntBASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC187A0A096LP49 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CCDC187A0A096LP49 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CCDC187A0A096LP49 AL139393.2-201ENST00000608721 2025 ntBASIC23.62■■□□□ 1.37
CCDC187A0A096LP49 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC187A0A096LP49 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC187A0A096LP49 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC187A0A096LP49 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC187A0A096LP49 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CCDC187A0A096LP49 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC187A0A096LP49 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC187A0A096LP49 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC187A0A096LP49 AC009299.2-201ENST00000482477 511 ntBASIC23.6■■□□□ 1.37
CCDC187A0A096LP49 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC187A0A096LP49 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC187A0A096LP49 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC187A0A096LP49 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC187A0A096LP49 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.58■■□□□ 1.36
CCDC187A0A096LP49 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 AC103834.1-201ENST00000520383 144 ntBASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CCDC187A0A096LP49 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC187A0A096LP49 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC187A0A096LP49 PVT1_1.1-201ENST00000615125 194 ntBASIC23.55■■□□□ 1.36
CCDC187A0A096LP49 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.54■■□□□ 1.36
CCDC187A0A096LP49 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC187A0A096LP49 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC187A0A096LP49 MIR4508-201ENST00000584178 70 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms