Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 IER3-202ENST00000376377 1350 ntBASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA4Q9UN74 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 KRT8P26-201ENST00000534154 1276 ntBASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 AP000550.4-202ENST00000639755 178 ntBASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA4Q9UN74 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA4Q9UN74 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHA4Q9UN74 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms