Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PVR-206ENST00000587785 356 ntTSL 311.41□□□□□ -0.585e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-209ENST00000489024 4084 ntTSL 59.27□□□□□ -0.935e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-203ENST00000459813 2036 ntTSL 28.71□□□□□ -1.015e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.035e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.55□□□□□ -1.045e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-210ENST00000496383 3220 ntTSL 58.34□□□□□ -1.075e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-208ENST00000488729 5988 ntTSL 1 (best)6.75□□□□□ -1.335e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-213ENST00000638224 806 ntTSL 56.54□□□□□ -1.365e-6■□□□□ 9.7
SND1Q7KZF4 KIDINS220-212ENST00000569008 8735 ntTSL 56.54□□□□□ -1.365e-6■□□□□ 9.7
SND1Q7KZF4 RAB1A-205ENST00000494188 771 ntTSL 223.82■■□□□ 1.46e-7■□□□□ 9.7
SND1Q7KZF4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.23■■□□□ 1.156e-7■□□□□ 9.7
SND1Q7KZF4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.09■□□□□ 0.816e-7■□□□□ 9.7
SND1Q7KZF4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.346e-7■□□□□ 9.7
SND1Q7KZF4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.83□□□□□ -0.046e-7■□□□□ 9.7
SND1Q7KZF4 PRPF8-210ENST00000574217 310 ntTSL 26.98□□□□□ -1.299e-9■□□□□ 9.7
SND1Q7KZF4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17■□□□□ 0.319e-13■□□□□ 9.7
SND1Q7KZF4 PLA2G2A-203ENST00000461140 573 ntTSL 314.9□□□□□ -0.025e-6■□□□□ 9.7
SND1Q7KZF4 ACSM3-213ENST00000568235 558 ntTSL 412.54□□□□□ -0.42e-7■□□□□ 9.7
SND1Q7KZF4 ACSM3-206ENST00000561795 580 ntTSL 46.23□□□□□ -1.412e-7■□□□□ 9.7
SND1Q7KZF4 ACTB-212ENST00000484841 1032 ntTSL 520.79■□□□□ 0.921e-20■□□□□ 9.7
SND1Q7KZF4 ACTB-210ENST00000477812 820 ntTSL 220.69■□□□□ 0.91e-20■□□□□ 9.7
SND1Q7KZF4 ACTB-209ENST00000473257 556 ntTSL 311.56□□□□□ -0.561e-20■□□□□ 9.7
SND1Q7KZF4 CEACAM1-214ENST00000600172 434 ntTSL 56.13□□□□□ -1.431e-8■□□□□ 9.7
SND1Q7KZF4 CEACAM1-210ENST00000471298 417 ntTSL 53.91□□□□□ -1.781e-8■□□□□ 9.7
SND1Q7KZF4 FADS3-205ENST00000526294 550 ntTSL 318.47■□□□□ 0.559e-9■□□□□ 9.7
SND1Q7KZF4 FADS3-202ENST00000414624 1452 ntTSL 217.84■□□□□ 0.459e-9■□□□□ 9.7
SND1Q7KZF4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.189e-9■□□□□ 9.7
SND1Q7KZF4 FADS3-210ENST00000531956 841 ntTSL 515.81■□□□□ 0.129e-9■□□□□ 9.7
SND1Q7KZF4 FADS3-212ENST00000534223 800 ntTSL 513.62□□□□□ -0.239e-9■□□□□ 9.7
SND1Q7KZF4 CMBL-207ENST00000514202 593 ntTSL 213.26□□□□□ -0.299e-9■□□□□ 9.7
SND1Q7KZF4 CMBL-204ENST00000506821 901 ntTSL 212.59□□□□□ -0.399e-9■□□□□ 9.7
SND1Q7KZF4 CMBL-206ENST00000511963 796 ntTSL 39.72□□□□□ -0.859e-9■□□□□ 9.7
SND1Q7KZF4 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC9.6□□□□□ -0.879e-9■□□□□ 9.7
SND1Q7KZF4 PSMA1-211ENST00000531156 574 ntTSL 49.36□□□□□ -0.913e-7■□□□□ 9.7
SND1Q7KZF4 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.029e-9■□□□□ 9.7
SND1Q7KZF4 CMBL-205ENST00000510532 701 ntTSL 37.46□□□□□ -1.229e-9■□□□□ 9.7
SND1Q7KZF4 PSMA1-204ENST00000526443 569 ntTSL 27.08□□□□□ -1.283e-7■□□□□ 9.7
SND1Q7KZF4 CYP2W1-205ENST00000468456 557 ntTSL 418.32■□□□□ 0.524e-9■□□□□ 9.7
SND1Q7KZF4 PET100-207ENST00000623154 1815 nt23.75■■□□□ 1.391e-6■□□□□ 9.7
SND1Q7KZF4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.021e-6■□□□□ 9.7
SND1Q7KZF4 AC008763.2-202ENST00000599243 570 ntAPPRIS ALT2 TSL 419.55■□□□□ 0.721e-6■□□□□ 9.7
SND1Q7KZF4 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 516.17■□□□□ 0.181e-6■□□□□ 9.7
SND1Q7KZF4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.061e-6■□□□□ 9.7
SND1Q7KZF4 PET100-204ENST00000600836 474 ntTSL 313.36□□□□□ -0.271e-6■□□□□ 9.7
SND1Q7KZF4 PET100-206ENST00000601829 317 ntTSL 212.2□□□□□ -0.461e-6■□□□□ 9.7
SND1Q7KZF4 PET100-205ENST00000601406 332 ntTSL 2 BASIC11.66□□□□□ -0.541e-6■□□□□ 9.7
SND1Q7KZF4 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.86□□□□□ -0.991e-6■□□□□ 9.7
SND1Q7KZF4 PET100-203ENST00000598540 375 ntTSL 37.52□□□□□ -1.211e-6■□□□□ 9.7
SND1Q7KZF4 ACSL3-211ENST00000542810 428 ntTSL 210.28□□□□□ -0.761e-7■□□□□ 9.7
SND1Q7KZF4 C1S-216ENST00000495061 832 ntTSL 316.51■□□□□ 0.235e-6■□□□□ 9.7
SND1Q7KZF4 PARP1-209ENST00000498787 628 ntTSL 215.18■□□□□ 0.021e-7■□□□□ 9.7
SND1Q7KZF4 POR-223ENST00000495770 559 ntTSL 214.79□□□□□ -0.043e-17■□□□□ 9.7
SND1Q7KZF4 PSMA1-208ENST00000529524 743 ntTSL 37.47□□□□□ -1.212e-6■□□□□ 9.6
SND1Q7KZF4 ITGAV-203ENST00000430709 736 ntTSL 57.18□□□□□ -1.266e-8■□□□□ 9.6
SND1Q7KZF4 EIF2S1-206ENST00000557310 999 ntTSL 213.28□□□□□ -0.283e-7■□□□□ 9.6
SND1Q7KZF4 EIF2S1-201ENST00000256383 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.453e-7■□□□□ 9.6
SND1Q7KZF4 EIF2S1-204ENST00000555876 783 ntTSL 210.02□□□□□ -0.813e-7■□□□□ 9.6
SND1Q7KZF4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.653e-7■□□□□ 9.6
SND1Q7KZF4 PKM-224ENST00000569857 1355 ntTSL 512.9□□□□□ -0.341e-12■□□□□ 9.6
SND1Q7KZF4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.095e-11■□□□□ 9.6
SND1Q7KZF4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -05e-11■□□□□ 9.6
SND1Q7KZF4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.055e-11■□□□□ 9.6
SND1Q7KZF4 IFITM3-203ENST00000531688 500 ntTSL 310.73□□□□□ -0.695e-11■□□□□ 9.6
SND1Q7KZF4 LDHB-209ENST00000542765 672 ntTSL 26.32□□□□□ -1.42e-22■□□□□ 9.6
SND1Q7KZF4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.346e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.76e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.566e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.266e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC12.06□□□□□ -0.486e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.846e-27■□□□□ 9.6
SND1Q7KZF4 DYNLL1-210ENST00000552316 670 nt7.51□□□□□ -1.216e-27■□□□□ 9.6
SND1Q7KZF4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.886e-8■□□□□ 9.6
SND1Q7KZF4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.716e-8■□□□□ 9.6
SND1Q7KZF4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.516e-8■□□□□ 9.6
SND1Q7KZF4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.22■□□□□ 0.359e-14■□□□□ 9.6
SND1Q7KZF4 GLMP-210ENST00000484214 943 ntTSL 214.96□□□□□ -0.013e-7■□□□□ 9.6
SND1Q7KZF4 TUBA1B-203ENST00000547476 584 ntTSL 412.14□□□□□ -0.474e-53■□□□□ 9.6
SND1Q7KZF4 TUBA1B-208ENST00000552984 574 ntTSL 411.82□□□□□ -0.524e-53■□□□□ 9.6
SND1Q7KZF4 ACTG1-204ENST00000571721 813 ntTSL 519.33■□□□□ 0.684e-16■□□□□ 9.6
SND1Q7KZF4 ACTG1-202ENST00000570382 471 ntTSL 413.54□□□□□ -0.244e-16■□□□□ 9.6
SND1Q7KZF4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.044e-8■□□□□ 9.6
SND1Q7KZF4 MMP11-204ENST00000437086 2071 ntTSL 220.65■□□□□ 0.94e-8■□□□□ 9.6
SND1Q7KZF4 MMP11-206ENST00000465385 3823 ntTSL 215.21■□□□□ 0.024e-8■□□□□ 9.6
SND1Q7KZF4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.13e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.093e-6■□□□□ 9.6
SND1Q7KZF4 EMC10-207ENST00000599293 1926 ntTSL 327.51■■■□□ 23e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.833e-6■□□□□ 9.6
SND1Q7KZF4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.743e-6■□□□□ 9.6
SND1Q7KZF4 EMC10-208ENST00000601780 2178 ntTSL 1 (best)24.26■■□□□ 1.473e-6■□□□□ 9.6
SND1Q7KZF4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.063e-7■□□□□ 9.6
SND1Q7KZF4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.59■■□□□ 1.053e-6■□□□□ 9.6
SND1Q7KZF4 NOP56-209ENST00000469588 950 ntTSL 221.49■■□□□ 1.033e-17■□□□□ 9.6
SND1Q7KZF4 ETFA-213ENST00000560309 633 ntTSL 321.28■■□□□ 13e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-230ENST00000460829 1804 ntTSL 220.93■□□□□ 0.943e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-233ENST00000475721 1271 ntTSL 220.56■□□□□ 0.883e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.833e-6■□□□□ 9.6
SND1Q7KZF4 ALG3-214ENST00000488976 910 ntTSL 220.04■□□□□ 0.83e-6■□□□□ 9.6
SND1Q7KZF4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.763e-6■□□□□ 9.6
SND1Q7KZF4 ALG3-212ENST00000482048 725 ntTSL 1 (best)19.59■□□□□ 0.733e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.713e-6■□□□□ 9.6
Retrieved 100 of 13,567 protein–RNA pairs in 775.8 ms