RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, humanhuman

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-208ENST00000529524 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
PSMA1-208ENST00000529524 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
PSMA1-208ENST00000529524 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
PSMA1-208ENST00000529524 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
PSMA1-208ENST00000529524 FOXD1Q16676 465 aa21.97■■□□□ 1.11
PSMA1-208ENST00000529524 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
PSMA1-208ENST00000529524 ADRA2BP18089 450 aa20.74■□□□□ 0.91
PSMA1-208ENST00000529524 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
PSMA1-208ENST00000529524 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
PSMA1-208ENST00000529524 MSH5O43196 834 aa20.5■□□□□ 0.87
PSMA1-208ENST00000529524 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
PSMA1-208ENST00000529524 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
PSMA1-208ENST00000529524 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
PSMA1-208ENST00000529524 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
PSMA1-208ENST00000529524 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
PSMA1-208ENST00000529524 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
PSMA1-208ENST00000529524 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
PSMA1-208ENST00000529524 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
PSMA1-208ENST00000529524 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
PSMA1-208ENST00000529524 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
PSMA1-208ENST00000529524 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
PSMA1-208ENST00000529524 KCNA4P22459 653 aa17.75■□□□□ 0.43
PSMA1-208ENST00000529524 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
PSMA1-208ENST00000529524 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
PSMA1-208ENST00000529524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
PSMA1-208ENST00000529524 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
PSMA1-208ENST00000529524 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
PSMA1-208ENST00000529524 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
PSMA1-208ENST00000529524 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
PSMA1-208ENST00000529524 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
PSMA1-208ENST00000529524 CAPN15O75808 1086 aa16.72■□□□□ 0.27
PSMA1-208ENST00000529524 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
PSMA1-208ENST00000529524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PSMA1-208ENST00000529524 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
PSMA1-208ENST00000529524 APLP2Q06481 763 aa16.63■□□□□ 0.25
PSMA1-208ENST00000529524 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
PSMA1-208ENST00000529524 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
PSMA1-208ENST00000529524 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
PSMA1-208ENST00000529524 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
PSMA1-208ENST00000529524 DSG3P32926 999 aa16.46■□□□□ 0.23
PSMA1-208ENST00000529524 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
PSMA1-208ENST00000529524 ABCB7O75027 752 aa16.34■□□□□ 0.21
PSMA1-208ENST00000529524 ZBTB22O15209 634 aa16.27■□□□□ 0.2
PSMA1-208ENST00000529524 POLA2Q14181 598 aa16.11■□□□□ 0.17
PSMA1-208ENST00000529524 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
PSMA1-208ENST00000529524 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
PSMA1-208ENST00000529524 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
PSMA1-208ENST00000529524 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
PSMA1-208ENST00000529524 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
PSMA1-208ENST00000529524 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
PSMA1-208ENST00000529524 FBLN2P98095 1184 aa15.56■□□□□ 0.08
PSMA1-208ENST00000529524 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
PSMA1-208ENST00000529524 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
PSMA1-208ENST00000529524 POTEHQ6S545 545 aa15.39■□□□□ 0.05
PSMA1-208ENST00000529524 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
PSMA1-208ENST00000529524 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
PSMA1-208ENST00000529524 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
PSMA1-208ENST00000529524 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
PSMA1-208ENST00000529524 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
PSMA1-208ENST00000529524 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
PSMA1-208ENST00000529524 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
PSMA1-208ENST00000529524 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
PSMA1-208ENST00000529524 SSUH2Q9Y2M2 353 aa15.06■□□□□ 0
PSMA1-208ENST00000529524 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
PSMA1-208ENST00000529524 SPDYE1Q8NFV5 336 aaPredicted RBP15□□□□□ -0.01
PSMA1-208ENST00000529524 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
PSMA1-208ENST00000529524 PIP4P2Q8N4L2 257 aa14.97□□□□□ -0.01
PSMA1-208ENST00000529524 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
PSMA1-208ENST00000529524 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
PSMA1-208ENST00000529524 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
PSMA1-208ENST00000529524 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
PSMA1-208ENST00000529524 HAX1O00165 279 aa14.72□□□□□ -0.05
PSMA1-208ENST00000529524 CHADLQ6NUI6 762 aa14.65□□□□□ -0.06
PSMA1-208ENST00000529524 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
PSMA1-208ENST00000529524 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
PSMA1-208ENST00000529524 EVX2Q03828 476 aa14.44□□□□□ -0.1
PSMA1-208ENST00000529524 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
PSMA1-208ENST00000529524 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
PSMA1-208ENST00000529524 FKBP8Q14318 412 aa14.39□□□□□ -0.11
PSMA1-208ENST00000529524 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
PSMA1-208ENST00000529524 PROM2Q8N271 834 aa14.38□□□□□ -0.11
PSMA1-208ENST00000529524 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
PSMA1-208ENST00000529524 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
PSMA1-208ENST00000529524 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
PSMA1-208ENST00000529524 MIER1Q8N108 512 aa14.21□□□□□ -0.13
PSMA1-208ENST00000529524 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
PSMA1-208ENST00000529524 GABBR2O75899 941 aa14.17□□□□□ -0.14
PSMA1-208ENST00000529524 PAK3O75914 559 aaPredicted RBP14.16□□□□□ -0.14
PSMA1-208ENST00000529524 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
PSMA1-208ENST00000529524 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
PSMA1-208ENST00000529524 CLCN6P51797 869 aa14.05□□□□□ -0.16
PSMA1-208ENST00000529524 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
PSMA1-208ENST00000529524 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
PSMA1-208ENST00000529524 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
PSMA1-208ENST00000529524 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
PSMA1-208ENST00000529524 PHF12Q96QT6 1004 aa13.95□□□□□ -0.18
PSMA1-208ENST00000529524 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
PSMA1-208ENST00000529524 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
PSMA1-208ENST00000529524 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
PSMA1-208ENST00000529524 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms